RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PGRMC1O00264 195 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 ACCSLQ4AC99 568 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 DARS2Q6PI48 645 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 REXO1L1PQ8IX06 675 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 UCMAQ8WVF2 138 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 BBS2Q9BXC9 721 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 ZNF334Q9HCZ1 680 aaPredicted RBP11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 TRIP11Q15643 1979 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 RCCD1A6NED2 376 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 ACSL4O60488 711 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 PAGE1O75459 146 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 PFKLP17858 780 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 CCDC26Q8TAB7 109 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 TCEAL4Q96EI5 215 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 MYRFLQ96LU7 910 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 PKMYT1Q99640 499 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 TRMT61BQ9BVS5 477 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 SMG9Q9H0W8 520 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 HOMER3Q9NSC5 361 aa11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 REXO2Q9Y3B8 237 aaKnown RBP11.52□□□□□ -0.57
TNFAIP3-201ENST00000237289 E7EVH7 732 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 FGGP02679 453 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 RHOCP08134 193 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 MX2P20592 715 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 SCML4Q8N228 414 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 CPA6Q8N4T0 437 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 CMASQ8NFW8 434 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 FGF13Q92913 245 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 TTYH1Q9H313 450 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 TRDMT1O14717 391 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 RARAP10276 462 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 OXCT1P55809 520 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 PUS10Q3MIT2 529 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 MFN1Q8IWA4 741 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 HJURPQ8NCD3 748 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 SHKBP1Q8TBC3 707 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 PIWIL1Q96J94 861 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 SNRNP25Q9BV90 132 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 WDR6Q9NNW5 1121 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 KCNU1A8MYU2 1149 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 LEFTY2O00292 366 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 TNFRSF10BO14763 440 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 CEBPBP17676 345 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 OR1E1P30953 314 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 ETFBP38117 255 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 GGCXP38435 758 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 PPP2R5DQ14738 602 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 PTCRAQ6ISU1 281 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 TFAP2DQ7Z6R9 452 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 SCD5Q86SK9 330 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 OSBPL8Q9BZF1 889 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 RNF14Q9UBS8 474 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 ZFP37Q9Y6Q3 630 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 GAS8O95995 478 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 GDI1P31150 447 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 CAMK1Q14012 370 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 PPP2R5EQ16537 467 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 KLHL7Q8IXQ5 586 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 ITFG1Q8TB96 612 aa11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 MAGOHBQ96A72 148 aaKnown RBP11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 USP15Q9Y4E8 981 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
TNFAIP3-201ENST00000237289 HHLA1C9JL84 531 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 TBL1XO60907 577 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 HMGA1P17096 107 aaKnown RBP11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 KCNQ1P51787 676 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 MPPE1Q53F39 396 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 C6orf118Q5T5N4 469 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 SLC2A13Q96QE2 648 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 NPY6RQ99463 290 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 TMEM59LQ9UK28 342 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 VPS28Q9UK41 221 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 ARHGAP42A6NI28 874 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 PPP1R12AO14974 1030 aaPredicted RBP11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 CST8O60676 142 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 LRCH4O75427 683 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 F11P03951 625 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 LMNB2Q03252 620 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 E2F5Q15329 346 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 LRRC38Q5VT99 294 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 SDE2Q6IQ49 451 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 GAREM2Q75VX8 874 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 BEND5Q7L4P6 421 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 ATPAF2Q8N5M1 289 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 ST13P5Q8NFI4 369 aaPredicted RBP11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 EXD1Q8NHP7 514 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 CIPCQ9C0C6 399 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 PRRC2BQ5JSZ5 2229 aaKnown RBP11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 SNX1Q13596 522 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 DAB2IPQ5VWQ8 1189 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 ARCQ7LC44 396 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 TTC8Q8TAM2 541 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 GRK7Q8WTQ7 553 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 SYT11Q9BT88 431 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 SLC46A2Q9BY10 475 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 ZYG11BQ9C0D3 744 aa11.5□□□□□ -0.57
TNFAIP3-201ENST00000237289 GOLGA6CA6NDK9 693 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 GOLGA6BA6NDN3 693 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 NEDD8-MDP1E9PL57 170 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 SGK1O00141 431 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms