RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TBC1D3BA6NDS4 549 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.18□□□□□ -0.3
LSM5-201ENST00000223084 GFRA2O00451 464 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 ACSL4O60488 711 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 GJB6O95452 261 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 PENKP01210 267 aaPredicted RBP13.18□□□□□ -0.3
LSM5-201ENST00000223084 CISD3P0C7P0 127 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 CCDC172P0C7W6 258 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 SKILP12757 684 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 TNFAIP3P21580 790 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 MMP8P22894 467 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 SLC6A4P31645 630 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 GRIA2P42262 883 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 CXCL12P48061 93 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 SLC11A2P49281 568 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 CCR3P51677 355 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 PTP4A2Q12974 167 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 NNTQ13423 1086 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 EIF4EBP2Q13542 120 aaPredicted RBP13.18□□□□□ -0.3
LSM5-201ENST00000223084 C2orf27AQ580R0 203 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 FAM133BQ5BKY9 247 aaKnown RBP13.18□□□□□ -0.3
LSM5-201ENST00000223084 ADGRF1Q5T601 910 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 OTUD1Q5VV17 481 aaPredicted RBP13.18□□□□□ -0.3
LSM5-201ENST00000223084 TRNP1Q6NT89 227 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 CCDC33Q8N5R6 958 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 MSANTD4Q8NCY6 345 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 USP33Q8TEY7 942 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 DDI1Q8WTU0 396 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 MYEOVQ96EZ4 313 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 SYT11Q9BT88 431 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 IER2Q9BTL4 223 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 EDEM3Q9BZQ6 932 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 HAUS4Q9H6D7 363 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 DDIT4Q9NX09 232 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 TAS2R14Q9NYV8 317 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.18□□□□□ -0.3
LSM5-201ENST00000223084 CALCOCO1Q9P1Z2 691 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 STOML2Q9UJZ1 356 aa13.18□□□□□ -0.3
LSM5-201ENST00000223084 A0A0A0MRY4 1105 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 M0QYT0 321 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 LATS1O95835 1130 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 CYBBP04839 570 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 CHRM1P11229 460 aaPredicted RBP13.17□□□□□ -0.3
LSM5-201ENST00000223084 TDGF1P13385 188 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 NOS2P35228 1153 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 TIE1P35590 1138 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 FLT3P36888 993 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 SCNN1AP37088 669 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 MATKP42679 507 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 NSFP46459 744 aaKnown RBP13.17□□□□□ -0.3
LSM5-201ENST00000223084 DGKGP49619 791 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 CENPCQ03188 943 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 DMWDQ09019 674 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 NME3Q13232 169 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 MPPE1Q53F39 396 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 FIGNQ5HY92 759 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 MAMSTRQ6ZN01 415 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 ZNF571Q7Z3V5 609 aaPredicted RBP13.17□□□□□ -0.3
LSM5-201ENST00000223084 DNAAF5Q86Y56 855 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 TERB1Q8NA31 727 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 RNF34Q969K3 372 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 TMA16Q96EY4 203 aaKnown RBP13.17□□□□□ -0.3
LSM5-201ENST00000223084 TBCBQ99426 244 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 NUP58Q9BVL2 599 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 NUCKS1Q9H1E3 243 aaKnown RBP13.17□□□□□ -0.3
LSM5-201ENST00000223084 METTL5Q9NRN9 209 aaKnown RBP13.17□□□□□ -0.3
LSM5-201ENST00000223084 AIPL1Q9NZN9 384 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 ADAM22Q9P0K1 906 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 TMEM59LQ9UK28 342 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 FBXO10Q9UK96 956 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 FBXO4Q9UKT5 387 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 R4GN57 208 aa13.17□□□□□ -0.3
LSM5-201ENST00000223084 TMCO5BA8MYB1 307 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 CHURC1-FNTBB4DL54 471 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 PRRT4C9JH25 899 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 K7ESF4 209 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 TBL1XO60907 577 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 APOEP02649 317 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 HOXD9P28356 352 aaPredicted RBP13.16□□□□□ -0.3
LSM5-201ENST00000223084 GBP1P32455 592 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 TNFRSF4P43489 277 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 KIR2DL1P43626 348 aaPredicted RBP13.16□□□□□ -0.3
LSM5-201ENST00000223084 SULT1E1P49888 294 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 ATXN1P54253 815 aaKnown RBP13.16□□□□□ -0.3
LSM5-201ENST00000223084 KLHL30Q0D2K2 578 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 C10orf76Q5T2E6 689 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 PIK3R6Q5UE93 754 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 RAP1GAP2Q684P5 730 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 HEATR6Q6AI08 1181 aaKnown RBP13.16□□□□□ -0.3
LSM5-201ENST00000223084 PHF13Q86YI8 300 aaPredicted RBP13.16□□□□□ -0.3
LSM5-201ENST00000223084 EMC1Q8N766 993 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 JOSD2Q8TAC2 188 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 AZIN2Q96A70 460 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 CFAP57Q96MR6 1250 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 PRICKLE1Q96MT3 831 aaPredicted RBP13.16□□□□□ -0.3
LSM5-201ENST00000223084 NPY6RQ99463 290 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 IRF2BPLQ9H1B7 796 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 STIM2Q9P246 746 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 HCN2Q9UL51 889 aa13.16□□□□□ -0.3
LSM5-201ENST00000223084 FANCMQ8IYD8 2048 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms