RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 SMPD1P17405 629 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 VCLP18206 1134 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 GABRB2P47870 512 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 CD151P48509 253 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 SLC26A2P50443 739 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 NAB1Q13506 487 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 TUBB3Q13509 450 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 CFAP157Q5JU67 520 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 OR5B17Q8NGF7 314 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 DEPTORQ8TB45 409 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 SLC7A3Q8WY07 619 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 TMEM143Q96AN5 459 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 SDCBP2Q9H190 292 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 SMARCAD1Q9H4L7 1026 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 ASNSD1Q9NWL6 643 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 FLRT1Q9NZU1 646 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 SAE1Q9UBE0 346 aaPredicted RBP16.43■□□□□ 0.22
SF3A2-201ENST00000221494 APOBEC2Q9Y235 224 aaKnown RBP16.43■□□□□ 0.22
SF3A2-201ENST00000221494 MAD1L1Q9Y6D9 718 aa16.43■□□□□ 0.22
SF3A2-201ENST00000221494 ZBTB42B2RXF5 422 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 DENRO43583 198 aaKnown RBP16.42■□□□□ 0.22
SF3A2-201ENST00000221494 TRUB2O95900 331 aaKnown RBP16.42■□□□□ 0.22
SF3A2-201ENST00000221494 CCDC130P13994 396 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 TGM2P21980 687 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 GRK2P25098 689 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 ARL2P36404 184 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 MAGEA3P43357 314 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 ALDH18A1P54886 795 aaKnown RBP16.42■□□□□ 0.22
SF3A2-201ENST00000221494 TBC1D25Q3MII6 688 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 DUSP28Q4G0W2 176 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 IQSEC1Q6DN90 963 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 CTAGE3PQ8IX95 158 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 MARVELD2Q8N4S9 558 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 CATSPER1Q8NEC5 780 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 PPTC7Q8NI37 304 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 GSDMBQ8TAX9 411 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 DGCR14Q96DF8 476 aaKnown RBP16.42■□□□□ 0.22
SF3A2-201ENST00000221494 ZFRQ96KR1 1074 aaKnown RBP16.42■□□□□ 0.22
SF3A2-201ENST00000221494 HAPLN2Q9GZV7 340 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 C6orf203Q9P0P8 240 aaPredicted RBP16.42■□□□□ 0.22
SF3A2-201ENST00000221494 OPHN1O60890 802 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 MAFO75444 373 aaPredicted RBP16.42■□□□□ 0.22
SF3A2-201ENST00000221494 VAV1P15498 845 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 CTGFP29279 349 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 SSTR3P32745 418 aaPredicted RBP16.42■□□□□ 0.22
SF3A2-201ENST00000221494 PTPN20Q4JDL3 420 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 SPATA24Q86W54 205 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 AFG1LQ8WV93 481 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 CFAP36Q96G28 342 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 CLPTM1LQ96KA5 538 aa16.42■□□□□ 0.22
SF3A2-201ENST00000221494 DDX50Q9BQ39 737 aaKnown RBP16.42■□□□□ 0.22
SF3A2-201ENST00000221494 SF3B1O75533 1304 aaKnown RBP eCLIP16.41■□□□□ 0.22
SF3A2-201ENST00000221494 MCM3APO60318 1980 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 BCLAF3A2AJT9 711 aaKnown RBP16.41■□□□□ 0.22
SF3A2-201ENST00000221494 ADCY6O43306 1168 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 GLRA3O75311 464 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 TMCC1O94876 653 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 IGHA2P01877 340 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 TPSB2P20231 275 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 PDE1BQ01064 536 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 CCNIQ14094 377 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 PDK2Q15119 407 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 TPSAB1Q15661 275 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 MCRS1Q96EZ8 462 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 HIC2Q96JB3 615 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 FAM84AQ96KN4 292 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 KCNK16Q96T55 309 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 MECRQ9BV79 373 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 USP29Q9HBJ7 922 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 ZNF236Q9UL36 1845 aa16.41■□□□□ 0.22
SF3A2-201ENST00000221494 C6orf222P0C671 652 aaPredicted RBP16.4■□□□□ 0.22
SF3A2-201ENST00000221494 HARSP12081 509 aaKnown RBP16.4■□□□□ 0.22
SF3A2-201ENST00000221494 MIPP30301 263 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 RPL5P46777 297 aaKnown RBP16.4■□□□□ 0.22
SF3A2-201ENST00000221494 PSMC1P62191 440 aaKnown RBP16.4■□□□□ 0.22
SF3A2-201ENST00000221494 DEUP1Q05D60 604 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 MSLNQ13421 630 aaPredicted RBP16.4■□□□□ 0.22
SF3A2-201ENST00000221494 IRF5Q13568 498 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 PDK3Q15120 406 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 CCL14Q16627 93 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 INSCQ1MX18 579 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 SMTNL2Q2TAL5 461 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 MMEL1Q495T6 779 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 SFT2D3Q587I9 215 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 HSP90AA5PQ58FG0 334 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 PRAMEF19Q5SWL8 479 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 OGFRL1Q5TC84 451 aaPredicted RBP16.4■□□□□ 0.22
SF3A2-201ENST00000221494 CYP4A22Q5TCH4 519 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 MBLAC2Q68D91 279 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 UGT2A3Q6UWM9 527 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 XYLT1Q86Y38 959 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 MAP7D3Q8IWC1 876 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 NDUFAF2Q8N183 169 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 ICA1LQ8NDH6 482 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 GSTCDQ8NEC7 633 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 JOSD2Q8TAC2 188 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 GDPD5Q8WTR4 605 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 STON2Q8WXE9 905 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 RNPEPQ9H4A4 650 aa16.4■□□□□ 0.22
SF3A2-201ENST00000221494 RAB6BQ9NRW1 208 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms