RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 PPP2R5DQ14738 602 aa24.55■■□□□ 1.52
HOMER3-201ENST00000221222 STRADAQ7RTN6 431 aa24.55■■□□□ 1.52
HOMER3-201ENST00000221222 LRRC8AQ8IWT6 810 aa24.55■■□□□ 1.52
HOMER3-201ENST00000221222 ATP2A3Q93084 1043 aa24.55■■□□□ 1.52
HOMER3-201ENST00000221222 CNPY3Q9BT09 278 aa24.55■■□□□ 1.52
HOMER3-201ENST00000221222 LINC00597Q9H2U6 94 aa24.55■■□□□ 1.52
HOMER3-201ENST00000221222 STOML2Q9UJZ1 356 aa24.55■■□□□ 1.52
HOMER3-201ENST00000221222 AGO1Q9UL18 857 aaKnown RBP24.55■■□□□ 1.52
HOMER3-201ENST00000221222 SYNJ2BP-COX16A0A087WUM0 186 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 CCR1P32246 355 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 RDXP35241 583 aaKnown RBP24.54■■□□□ 1.52
HOMER3-201ENST00000221222 MAGEA1P43355 309 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 CXCR3P49682 368 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 ATP11AP98196 1134 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 OGDHQ02218 1023 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 DEUP1Q05D60 604 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 C15orf59Q2T9L4 293 aaPredicted RBP24.54■■□□□ 1.52
HOMER3-201ENST00000221222 ZC3H12AQ5D1E8 599 aaKnown RBP24.54■■□□□ 1.52
HOMER3-201ENST00000221222 TRIM68Q6AZZ1 485 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 DENND1CQ8IV53 801 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 FAM217AQ8IXS0 508 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 ADGRG2Q8IZP9 1017 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 NUP85Q9BW27 656 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 LUC7LQ9NQ29 371 aaKnown RBP24.54■■□□□ 1.52
HOMER3-201ENST00000221222 HPS4Q9NQG7 708 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 COX16Q9P0S2 106 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 UVRAGQ9P2Y5 699 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 KCNU1A8MYU2 1149 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 CCP110O43303 1012 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 IPO7O95373 1038 aaKnown RBP24.54■■□□□ 1.52
HOMER3-201ENST00000221222 APOEP02649 317 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 MTA1Q13330 715 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 BRMS1LQ5PSV4 323 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 SND1Q7KZF4 910 aaKnown RBP eCLIP24.54■■□□□ 1.52
HOMER3-201ENST00000221222 TRIM7Q9C029 511 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 EBF3Q9H4W6 596 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 PAXBP1Q9Y5B6 917 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 PCDHA13Q9Y5I0 950 aa24.54■■□□□ 1.52
HOMER3-201ENST00000221222 COL4A3Q01955 1670 aa24.53■■□□□ 1.52
HOMER3-201ENST00000221222 NFATC1O95644 943 aa24.53■■□□□ 1.52
HOMER3-201ENST00000221222 ARSAP15289 507 aa24.53■■□□□ 1.52
HOMER3-201ENST00000221222 SLC11A2P49281 568 aa24.53■■□□□ 1.52
HOMER3-201ENST00000221222 TNK2Q07912 1038 aa24.53■■□□□ 1.52
HOMER3-201ENST00000221222 ZNF252P-AS1Q0IIN9 211 aa24.53■■□□□ 1.52
HOMER3-201ENST00000221222 RUNX3Q13761 415 aa24.53■■□□□ 1.52
HOMER3-201ENST00000221222 TCEAL1Q15170 157 aa24.53■■□□□ 1.52
HOMER3-201ENST00000221222 CDO1Q16878 200 aa24.53■■□□□ 1.52
HOMER3-201ENST00000221222 SH3PXD2AQ5TCZ1 1133 aa24.53■■□□□ 1.52
HOMER3-201ENST00000221222 CPXM2Q8N436 756 aa24.53■■□□□ 1.52
HOMER3-201ENST00000221222 FAM172AQ8WUF8 416 aa24.53■■□□□ 1.52
HOMER3-201ENST00000221222 BTN2A3PQ96KV6 586 aa24.53■■□□□ 1.52
HOMER3-201ENST00000221222 ACSL4O60488 711 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 DESP17661 470 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 CHKAP35790 457 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 ATXN1P54253 815 aaKnown RBP24.52■■□□□ 1.52
HOMER3-201ENST00000221222 HDAC4P56524 1084 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 ADGRF1Q5T601 910 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 CPA6Q8N4T0 437 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 ATP6V0D2Q8N8Y2 350 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 ZNF564Q8TBZ8 553 aaPredicted RBP24.52■■□□□ 1.52
HOMER3-201ENST00000221222 CSGALNACT1Q8TDX6 532 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 RNF34Q969K3 372 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 PHOX2BQ99453 314 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 WDCPQ9H6R7 721 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 ECT2Q9H8V3 914 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 ARHGEF38Q9NXL2 777 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 GTSE1Q9NYZ3 720 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 CTTNBP2NLQ9P2B4 639 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 SLC12A6Q9UHW9 1150 aa24.52■■□□□ 1.52
HOMER3-201ENST00000221222 REXO2Q9Y3B8 237 aaKnown RBP24.52■■□□□ 1.52
HOMER3-201ENST00000221222 ARHGAP6O43182 974 aa24.51■■□□□ 1.51
HOMER3-201ENST00000221222 CYP17A1P05093 508 aa24.51■■□□□ 1.51
HOMER3-201ENST00000221222 PSMA2P25787 234 aa24.51■■□□□ 1.51
HOMER3-201ENST00000221222 MLLT6P55198 1093 aaPredicted RBP24.51■■□□□ 1.51
HOMER3-201ENST00000221222 ITPRIPL2Q3MIP1 535 aa24.51■■□□□ 1.51
HOMER3-201ENST00000221222 RHBDF2Q6PJF5 856 aa24.51■■□□□ 1.51
HOMER3-201ENST00000221222 RHOT2Q8IXI1 618 aa24.51■■□□□ 1.51
HOMER3-201ENST00000221222 RFFLQ8WZ73 363 aa24.51■■□□□ 1.51
HOMER3-201ENST00000221222 WNT16Q9UBV4 365 aa24.51■■□□□ 1.51
HOMER3-201ENST00000221222 ANAPC7Q9UJX3 599 aa24.51■■□□□ 1.51
HOMER3-201ENST00000221222 MYOFQ9NZM1 2061 aa24.51■■□□□ 1.51
HOMER3-201ENST00000221222 OTOL1A6NHN0 477 aaPredicted RBP24.5■■□□□ 1.51
HOMER3-201ENST00000221222 MTA2O94776 668 aa24.5■■□□□ 1.51
HOMER3-201ENST00000221222 KRT83P78385 493 aa24.5■■□□□ 1.51
HOMER3-201ENST00000221222 CCZ1BP86790 482 aa24.5■■□□□ 1.51
HOMER3-201ENST00000221222 CCZ1P86791 482 aaPredicted RBP24.5■■□□□ 1.51
HOMER3-201ENST00000221222 ACAP1Q15027 740 aa24.5■■□□□ 1.51
HOMER3-201ENST00000221222 DHCR24Q15392 516 aa24.5■■□□□ 1.51
HOMER3-201ENST00000221222 RAB6CQ53S08 254 aa24.5■■□□□ 1.51
HOMER3-201ENST00000221222 FAM133BQ5BKY9 247 aaKnown RBP24.5■■□□□ 1.51
HOMER3-201ENST00000221222 FAM131BQ86XD5 332 aa24.5■■□□□ 1.51
HOMER3-201ENST00000221222 RAB6CQ9H0N0 254 aa24.5■■□□□ 1.51
HOMER3-201ENST00000221222 SPHK2Q9NRA0 654 aa24.5■■□□□ 1.51
HOMER3-201ENST00000221222 IP6K2Q9UHH9 426 aa24.5■■□□□ 1.51
HOMER3-201ENST00000221222 GFRA2O00451 464 aa24.49■■□□□ 1.51
HOMER3-201ENST00000221222 MOCS2O96007 188 aaPredicted RBP24.49■■□□□ 1.51
HOMER3-201ENST00000221222 ADH1CP00326 375 aa24.49■■□□□ 1.51
HOMER3-201ENST00000221222 GLULP15104 373 aa24.49■■□□□ 1.51
HOMER3-201ENST00000221222 AVPR2P30518 371 aa24.49■■□□□ 1.51
HOMER3-201ENST00000221222 NR1H3Q13133 447 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms