RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 ZNF77Q15935 545 aa28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 PARM1Q6UWI2 310 aa28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 DENND1CQ8IV53 801 aa28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 FGF14Q92915 247 aa28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 XPO7Q9UIA9 1087 aaKnown RBP28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 USP18Q9UMW8 372 aa28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 GOLGA6L9A6NEM1 432 aa28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 TNNT1P13805 278 aa28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 TAS2R40P59535 323 aa28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 BRMS1LQ5PSV4 323 aa28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 UNC45BQ8IWX7 931 aa28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 LRRC3BQ96PB8 259 aa28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 NCAPGQ9BPX3 1015 aa28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 ZWILCHQ9H900 591 aa28.29■■■□□ 2.12
CHMP4B-201ENST00000217402 HEPACAM2A8MVW5 462 aa28.28■■■□□ 2.12
CHMP4B-201ENST00000217402 KCNU1A8MYU2 1149 aa28.28■■■□□ 2.12
CHMP4B-201ENST00000217402 I6L893 689 aaPredicted RBP28.28■■■□□ 2.12
CHMP4B-201ENST00000217402 IL1R2P27930 398 aa28.28■■■□□ 2.12
CHMP4B-201ENST00000217402 SLC1A1P43005 524 aa28.28■■■□□ 2.12
CHMP4B-201ENST00000217402 AAK1Q2M2I8 961 aa28.28■■■□□ 2.12
CHMP4B-201ENST00000217402 ALS2CR12Q96Q35 445 aa28.28■■■□□ 2.12
CHMP4B-201ENST00000217402 ARHGEF38Q9NXL2 777 aa28.28■■■□□ 2.12
CHMP4B-201ENST00000217402 GREM1O60565 184 aa28.27■■■□□ 2.12
CHMP4B-201ENST00000217402 FTCDO95954 541 aa28.27■■■□□ 2.12
CHMP4B-201ENST00000217402 SLC25A11Q02978 314 aaKnown RBP28.27■■■□□ 2.12
CHMP4B-201ENST00000217402 SMTNL2Q2TAL5 461 aa28.27■■■□□ 2.12
CHMP4B-201ENST00000217402 TXNRD3NBQ6F5E7 133 aa28.27■■■□□ 2.12
CHMP4B-201ENST00000217402 SYCE1Q8N0S2 351 aa28.27■■■□□ 2.12
CHMP4B-201ENST00000217402 KCND1Q9NSA2 647 aa28.27■■■□□ 2.12
CHMP4B-201ENST00000217402 AGO1Q9UL18 857 aaKnown RBP28.27■■■□□ 2.12
CHMP4B-201ENST00000217402 UNC80Q8N2C7 3258 aa28.27■■■□□ 2.12
CHMP4B-201ENST00000217402 TCF3P15923 654 aa28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 HADHQ16836 314 aaKnown RBP28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 ARL13BQ3SXY8 428 aa28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 KCNT1Q5JUK3 1230 aa28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 MTSS1LQ765P7 747 aa28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 SLFN11Q7Z7L1 901 aa28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 ATP6V0D2Q8N8Y2 350 aa28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 BPIFB1Q8TDL5 484 aa28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 BTN2A3PQ96KV6 586 aa28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 DCLK3Q9C098 648 aa28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 TMEM51Q9NW97 253 aa28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 GPATCH2LQ9NWQ4 482 aa28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 SLC12A6Q9UHW9 1150 aa28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 NUMBLQ9Y6R0 609 aa28.26■■■□□ 2.11
CHMP4B-201ENST00000217402 E2F8A0AVK6 867 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 PAGE1O75459 146 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 ADRA1BP35368 520 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 GGCXP38435 758 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 HTR4Q13639 388 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 VITQ6UXI7 678 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 Q6ZNB5 142 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 CYP4V2Q6ZWL3 525 aaPredicted RBP28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 HTR3DQ70Z44 454 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 BBS7Q8IWZ6 715 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 SNRNP25Q9BV90 132 aaKnown RBP28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 PLA2G2FQ9BZM2 168 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 OBP2AQ9NY56 170 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 SLC11A2P49281 568 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 PEX26Q7Z412 305 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 TRIM58Q8NG06 486 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 NTAN1Q96AB6 310 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 E2F7Q96AV8 911 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 ELSPBP1Q96BH3 223 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 RPP25Q9BUL9 199 aaKnown RBP28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 SIK2Q9H0K1 926 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 FZD10Q9ULW2 581 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 SNX10Q9Y5X0 201 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 WNT6Q9Y6F9 365 aa28.25■■■□□ 2.11
CHMP4B-201ENST00000217402 KIF5CO60282 957 aa28.24■■■□□ 2.11
CHMP4B-201ENST00000217402 GRM2Q14416 872 aa28.24■■■□□ 2.11
CHMP4B-201ENST00000217402 EFHC2Q5JST6 749 aa28.24■■■□□ 2.11
CHMP4B-201ENST00000217402 RSAD2Q8WXG1 361 aa28.24■■■□□ 2.11
CHMP4B-201ENST00000217402 HSPH1Q92598 858 aa28.24■■■□□ 2.11
CHMP4B-201ENST00000217402 MAGEB5Q9BZ81 275 aa28.24■■■□□ 2.11
CHMP4B-201ENST00000217402 LIMD1Q9UGP4 676 aa28.24■■■□□ 2.11
CHMP4B-201ENST00000217402 PACSIN2Q9UNF0 486 aaPredicted RBP28.24■■■□□ 2.11
CHMP4B-201ENST00000217402 AP4E1Q9UPM8 1137 aa28.24■■■□□ 2.11
CHMP4B-201ENST00000217402 GOLGA6L7A0A1B0GV03 622 aa28.23■■■□□ 2.11
CHMP4B-201ENST00000217402 ANHXE9PGG2 379 aa28.23■■■□□ 2.11
CHMP4B-201ENST00000217402 ACSL4O60488 711 aa28.23■■■□□ 2.11
CHMP4B-201ENST00000217402 ECI2O75521 394 aa28.23■■■□□ 2.11
CHMP4B-201ENST00000217402 ZNF569Q5MCW4 686 aa28.23■■■□□ 2.11
CHMP4B-201ENST00000217402 PIK3R6Q5UE93 754 aa28.23■■■□□ 2.11
CHMP4B-201ENST00000217402 NADSYN1Q6IA69 706 aa28.23■■■□□ 2.11
CHMP4B-201ENST00000217402 NT5DC3Q86UY8 548 aa28.23■■■□□ 2.11
CHMP4B-201ENST00000217402 PLCD3Q8N3E9 789 aa28.23■■■□□ 2.11
CHMP4B-201ENST00000217402 KLHL11Q9NVR0 708 aa28.23■■■□□ 2.11
CHMP4B-201ENST00000217402 AMFRQ9UKV5 643 aa28.23■■■□□ 2.11
CHMP4B-201ENST00000217402 RARAP10276 462 aa28.22■■■□□ 2.11
CHMP4B-201ENST00000217402 VCPP55072 806 aaKnown RBP28.22■■■□□ 2.11
CHMP4B-201ENST00000217402 SCAPQ12770 1279 aa28.22■■■□□ 2.11
CHMP4B-201ENST00000217402 ATP13A4Q4VNC1 1196 aa28.22■■■□□ 2.11
CHMP4B-201ENST00000217402 ZFYVE27Q5T4F4 411 aa28.22■■■□□ 2.11
CHMP4B-201ENST00000217402 ERMARDQ5T6L9 678 aa28.22■■■□□ 2.11
CHMP4B-201ENST00000217402 RAP1GAP2Q684P5 730 aa28.22■■■□□ 2.11
CHMP4B-201ENST00000217402 RHOT1Q8IXI2 618 aa28.22■■■□□ 2.11
CHMP4B-201ENST00000217402 ZDHHC14Q8IZN3 488 aa28.22■■■□□ 2.11
CHMP4B-201ENST00000217402 PYROXD2Q8N2H3 581 aa28.22■■■□□ 2.11
CHMP4B-201ENST00000217402 STAU2Q9NUL3 570 aaKnown RBP eCLIP28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms