RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CCZ1BP86790 482 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 CCZ1P86791 482 aaPredicted RBP14.14□□□□□ -0.15
SIX4-201ENST00000216513 NFIL3Q16649 462 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 ARMC12Q5T9G4 340 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 ANO5Q75V66 913 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 HDDC3Q8N4P3 179 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 ZNF614Q8N883 585 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 MDM1Q8TC05 714 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 OR8D1Q8WZ84 308 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 HES6Q96HZ4 224 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 MTMR9Q96QG7 549 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 EIF2AQ9BY44 585 aaKnown RBP14.14□□□□□ -0.15
SIX4-201ENST00000216513 NLNQ9BYT8 704 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 ZNF518BQ9C0D4 1074 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 PTPRHQ9HD43 1115 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 TCP11X1B4DZS4 312 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 RNASEH2AO75792 299 aaKnown RBP14.14□□□□□ -0.15
SIX4-201ENST00000216513 CPA2P48052 419 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 CLCNKBP51801 687 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 FBXW10Q5XX13 1052 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 USP45Q70EL2 814 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 B3GALT6Q96L58 329 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 ZFYVE1Q9HBF4 777 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 SLC24A3Q9HC58 644 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 RRN3Q9NYV6 651 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 VPS9D1Q9Y2B5 631 aa14.14□□□□□ -0.15
SIX4-201ENST00000216513 PPP1R3GB7ZBB8 358 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 CYP2F1P24903 491 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 HPCAP84074 193 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 HJURPQ8NCD3 748 aaPredicted RBP14.13□□□□□ -0.15
SIX4-201ENST00000216513 CCDC90BQ9GZT6 254 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 KLF15Q9UIH9 416 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 E5RJQ4 531 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 SLC20A1Q8WUM9 679 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 SHDQ96IW2 340 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 INPP4AQ96PE3 977 aaPredicted RBP14.13□□□□□ -0.15
SIX4-201ENST00000216513 KCTD10Q9H3F6 313 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 PCMTD2Q9NV79 361 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 NCDNQ9UBB6 729 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 GTF2IRD1Q9UHL9 959 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 GPR1P46091 355 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 PDK2Q15119 407 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 C1orf146Q5VVC0 180 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 ZNF606Q8WXB4 792 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 TMEM159Q96B96 161 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 CXorf40BQ96DE9 158 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 SGF29Q96ES7 293 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 UTP6Q9NYH9 597 aaKnown RBP14.13□□□□□ -0.15
SIX4-201ENST00000216513 CTIFO43310 598 aaKnown RBP14.13□□□□□ -0.15
SIX4-201ENST00000216513 KIF2BQ8N4N8 673 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 SPATA4Q8NEY3 305 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 COG1Q8WTW3 980 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 FSBPO95073 299 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 GDI1P31150 447 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 MTSS1LQ765P7 747 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 ARHGEF19Q8IW93 802 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 WDR75Q8IWA0 830 aaKnown RBP14.13□□□□□ -0.15
SIX4-201ENST00000216513 MYO1HQ8N1T3 1032 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 TRIM4Q9C037 500 aa14.13□□□□□ -0.15
SIX4-201ENST00000216513 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.13□□□□□ -0.15
SIX4-201ENST00000216513 TGM2P21980 687 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 RRM1P23921 792 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 NME5P56597 212 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 TEAD4Q15561 434 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 DET1Q7L5Y6 550 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 PTAR1Q7Z6K3 402 aaPredicted RBP14.12□□□□□ -0.15
SIX4-201ENST00000216513 OR14C36Q8NHC7 312 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 TIFAQ96CG3 184 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 POLMQ9NP87 494 aaPredicted RBP14.12□□□□□ -0.15
SIX4-201ENST00000216513 PTPN3P26045 913 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 PSEN1P49768 467 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 LAYNQ6UX15 382 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 LRRN4Q8WUT4 740 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 FAM47E-STBD1D6RA91 191 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 ADCY2Q08462 1091 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 SPARCL1Q14515 664 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 SARM1Q6SZW1 724 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 ALG6Q9Y672 507 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 LSM8O95777 96 aaKnown RBP14.12□□□□□ -0.15
SIX4-201ENST00000216513 STMN1P16949 149 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 POU4F1Q01851 419 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 TAF10Q12962 218 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 GRB14Q14449 540 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 C9orf57Q5W0N0 161 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 KRT80Q6KB66 452 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 OTOP3Q7RTS5 596 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 KCNMB3Q9NPA1 279 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 TLR9Q9NR96 1032 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 TRAF3IP3Q9Y228 551 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 DNAJC16Q9Y2G8 782 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 RGPD8O14715 1765 aaPredicted RBP14.12□□□□□ -0.15
SIX4-201ENST00000216513 E2F6O75461 281 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 GYPCP04921 128 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 TMEM119Q4V9L6 283 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 ARMCX6Q7L4S7 300 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 KCNK18Q7Z418 384 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 NUDCD3Q8IVD9 361 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 TSTD1Q8NFU3 115 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 TRIB2Q92519 343 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 KBTBD4Q9NVX7 518 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms