RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 DGKIO75912 1065 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 PIAS1O75925 651 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 KRT38O76015 456 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 B3GAT3O94766 335 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 F9P00740 461 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 LTFP02788 710 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 ASGR1P07306 291 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 SNRPAP09012 282 aaKnown RBP8.53□□□□□ -1.04
VAMP3-201ENST00000054666 NEFHP12036 1026 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 SKIP12755 728 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 PAX3P23760 479 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 CTGFP29279 349 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 CD52P31358 61 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 GLUD2P49448 558 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 ZNF135P52742 658 aaPredicted RBP8.53□□□□□ -1.04
VAMP3-201ENST00000054666 PITX1P78337 314 aaPredicted RBP8.53□□□□□ -1.04
VAMP3-201ENST00000054666 SETDB1Q15047 1291 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 PRKD1Q15139 912 aaPredicted RBP8.53□□□□□ -1.04
VAMP3-201ENST00000054666 SLC1A5Q15758 541 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 UPP1Q16831 310 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 SPRED3Q2MJR0 410 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 ANKRD20A2Q5SQ80 823 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 ANKRD20A1Q5TYW2 823 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 ANKRD20A3Q5VUR7 823 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 KIAA0319Q5VV43 1072 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 SYPL2Q5VXT5 272 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 RNF43Q68DV7 783 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 RFX8Q6ZV50 586 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 HFE2Q6ZVN8 426 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 BNIPLQ7Z465 357 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 MRPL10Q7Z7H8 261 aaKnown RBP8.53□□□□□ -1.04
VAMP3-201ENST00000054666 BANPQ8N9N5 519 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 CCDC63Q8NA47 563 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 C3orf58Q8NDZ4 430 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 TCP10LQ8TDR4 215 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 DEPDC1BQ8WUY9 529 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 MYLPFQ96A32 169 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 LGMNQ99538 433 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 SMOQ99835 787 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 RXFP1Q9HBX9 757 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 EIF2B3Q9NR50 452 aaKnown RBP8.53□□□□□ -1.04
VAMP3-201ENST00000054666 PIGVQ9NUD9 493 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 DDIT4Q9NX09 232 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 SEPT10Q9P0V9 454 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 ABT1Q9ULW3 272 aaKnown RBP8.53□□□□□ -1.04
VAMP3-201ENST00000054666 PADI3Q9ULW8 664 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 MFHAS1Q9Y4C4 1052 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 RAD54BQ9Y620 910 aa8.53□□□□□ -1.04
VAMP3-201ENST00000054666 CFAP73A6NFT4 308 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 YJEFN3A6XGL0 299 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 E7ENQ6 273 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 COPEO14579 308 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 NRP1O14786 923 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 EDF1O60869 148 aaKnown RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 ZNF623O75123 536 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 ADAMTS4O75173 837 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 USP17L7P0C7H9 530 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 TROVE2P10155 538 aaKnown RBP eCLIP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 MLNP12872 115 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 PRKCHP24723 683 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 ADRA1DP25100 572 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 ALDH3A1P30838 453 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 SERPINB6P35237 376 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 MAGEA3P43357 314 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 TSPY1Q01534 308 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 FAAP100Q0VG06 881 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 SCAPQ12770 1279 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 DPYSQ14117 519 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 PAFAH1B3Q15102 231 aaKnown RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 MAPRE1Q15691 268 aaKnown RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 RAB41Q5JT25 222 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 CASC4Q6P4E1 433 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 UNC5AQ6ZN44 842 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 PAXIP1Q6ZW49 1069 aaPredicted RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 COLGALT1Q8NBJ5 622 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 PCSK9Q8NBP7 692 aaKnown RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 IRGQQ8WZA9 623 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 CDKL2Q92772 493 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 MTBPQ96DY7 904 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 STAMBPL1Q96FJ0 436 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 P2RY11Q96G91 374 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 UROC1Q96N76 676 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 KLF6Q99612 283 aaPredicted RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 EPAS1Q99814 870 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 EBNA1BP2Q99848 306 aaKnown RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 MAGEB5Q9BZ81 275 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 ARHGAP39Q9C0H5 1083 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 AGO3Q9H9G7 860 aaKnown RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 SLC40A1Q9NP59 571 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 DMAP1Q9NPF5 467 aaPredicted RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 MIOSQ9NXC5 875 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 GABRQQ9UN88 632 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 INPP5FQ9Y2H2 1132 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 PCDHA11Q9Y5I1 949 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 TLL2Q9Y6L7 1015 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 USH1CQ9Y6N9 552 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 CASP8AP2Q9UKL3 1982 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 FAM155AB1AL88 458 aaPredicted RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 TRIM49D1C9J1S8 452 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 NCAM2O15394 837 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms