RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CLUHO75153 1309 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 SYNJ2BP-COX16A0A087WUM0 186 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 GOLGA8MH3BSY2 632 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 TRIM66O15016 1216 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 NCAM2O15394 837 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 MFSD11O43934 449 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 TPSB2P20231 275 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 PHBP35232 272 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 GPX6P59796 221 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 YWHAGP61981 247 aaKnown RBP eCLIP14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 NR1H3Q13133 447 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 MTFR1Q15390 333 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 TPSAB1Q15661 275 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 ZSCAN26Q16670 478 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 TCTN1Q2MV58 587 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 CCDC38Q502W7 563 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 BRMS1LQ5PSV4 323 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 C1orf53Q5VUE5 145 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 HEATR6Q6AI08 1181 aaKnown RBP14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 B4GALNT4Q76KP1 1039 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 CTU1Q7Z7A3 348 aaKnown RBP14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 EXOC3L1Q86VI1 746 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 SCAMP5Q8TAC9 235 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 ADAM32Q8TC27 787 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 HTR3CQ8WXA8 447 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 WDR83Q9BRX9 315 aaKnown RBP14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 BRD8Q9H0E9 1235 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 EPN3Q9H201 632 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 SMOC2Q9H3U7 446 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 MARCH5Q9NX47 278 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 ARHGEF38Q9NXL2 777 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 IL37Q9NZH6 218 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 COX16Q9P0S2 106 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 SLC24A2Q9UI40 661 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 SCML2Q9UQR0 700 aa14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.79□□□□□ -0.04
RTFDC1-201ENST00000023939 A0A0A0MRY4 1105 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 PPP1R12AO14974 1030 aaPredicted RBP14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 CREB3O43889 395 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 SPAG6O75602 509 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 HTR7P34969 479 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 SMARCB1Q12824 385 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 SEMA5AQ13591 1074 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 ZNF280DQ6N043 979 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 SCD5Q86SK9 330 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 TADA2BQ86TJ2 420 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 VPS52Q8N1B4 723 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 CCDC110Q8TBZ0 833 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 MAML1Q92585 1016 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 ARHGEF2Q92974 986 aaKnown RBP14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 SPATA13Q96N96 652 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 EPAS1Q99814 870 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 FERMT1Q9BQL6 677 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 CRISPLD2Q9H0B8 497 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 RNF208Q9H0X6 261 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 VPS37BQ9H9H4 285 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 MFHAS1Q9Y4C4 1052 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 PCDHB5Q9Y5E4 795 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 TEX264Q9Y6I9 313 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 TANC1Q9C0D5 1861 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 TTC3P53804 2025 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 EXOC1LA0A1B0GW35 172 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 ERICH4A6NGS2 130 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 FAM72CH0Y354 149 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 IRAK2O43187 625 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 TBC1D4O60343 1298 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 PQBP1O60828 265 aaKnown RBP14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 OPHN1O60890 802 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 MAP3K6O95382 1288 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 OR4Q2P0C623 313 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 VAV1P15498 845 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 ERCC2P18074 760 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 GCAP28676 217 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 FDFT1P37268 417 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 SLC11A1P49279 550 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 TPI1P60174 286 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 CDK16Q00536 496 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 CTXN3Q4LDR2 81 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 FAM72AQ5TYM5 149 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 FAM171A1Q5VUB5 890 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 TTC19Q6DKK2 380 aaPredicted RBP14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 FAM72DQ6L9T8 149 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 SLC39A5Q6ZMH5 540 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 FAM72BQ86X60 149 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 ARHGAP18Q8N392 663 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 LRRC39Q96DD0 335 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 HAPLN3Q96S86 360 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 GPR62Q9BZJ7 368 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 TKTL2Q9H0I9 626 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 HIPK3Q9H422 1215 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 FBXO44Q9H4M3 255 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 ACSS3Q9H6R3 686 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 ETNK1Q9HBU6 452 aa14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 ABI2Q9NYB9 513 aaPredicted RBP14.78□□□□□ -0.04
RTFDC1-201ENST00000023939 FAM92AA1XBS5 289 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 STK10O94804 968 aaKnown RBP14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 METTL18O95568 372 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 AMHP03971 560 aa14.77□□□□□ -0.05
RTFDC1-201ENST00000023939 GALTP07902 379 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms