RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 FAM84AQ96KN4 292 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 USP18Q9UMW8 372 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 CSDE1O75534 798 aaKnown RBP12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 CLK2P49760 499 aaKnown RBP12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 LPIN1Q14693 890 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 ATP13A4Q4VNC1 1196 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 FASTKD1Q53R41 847 aaKnown RBP12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 TCHHL1Q5QJ38 904 aaPredicted RBP12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 RNF135Q8IUD6 432 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 PWWP2AQ96N64 755 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 PRDM5Q9NQX1 630 aaPredicted RBP12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 ERAP1Q9NZ08 941 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 SLC12A6Q9UHW9 1150 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 DCDC2CA8MYV0 355 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 GOLGA8TH3BQL2 631 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 VWA5AO00534 786 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 CYP1A2P05177 515 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 RAG1P15918 1043 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 PAMP19021 973 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 ITPRIPL1Q6GPH6 555 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 WDR49Q8IV35 697 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 CCDC33Q8N5R6 958 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 OR6Y1Q8NGX8 325 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 NAT14Q8WUY8 206 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 ZNF560Q96MR9 790 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 GPATCH2LQ9NWQ4 482 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.47□□□□□ -0.415e-7■■■□□ 17.9
TSPAN9-201ENST00000011898 CPSF3Q9UKF6 684 aaKnown RBP12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 GRIN2DO15399 1336 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 UNCXA6NJT0 531 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 TAC1P20366 129 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 NCKAP1LP55160 1127 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 PPIL2Q13356 520 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 DCAF6Q58WW2 860 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 CLEC4FQ8N1N0 589 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 TCP10LQ8TDR4 215 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 ECSITQ9BQ95 431 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 EBF2Q9HAK2 575 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 PIDD1Q9HB75 910 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 BLOC1S6Q9UL45 172 aa12.47□□□□□ -0.41
TSPAN9-201ENST00000011898 CNOT3O75175 753 aaKnown RBP12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 RALGDSQ12967 914 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 ITGA7Q13683 1181 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 CNPY1Q3B7I2 92 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 FRA10AC1Q70Z53 315 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 POU5F2Q8N7G0 328 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 TUBGCP3Q96CW5 907 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 LRMDAQ9H2I8 198 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 RAD21L1Q9H4I0 556 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 PIN4Q9Y237 131 aaKnown RBP12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 PPME1Q9Y570 386 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 GPC6Q9Y625 555 aaPredicted RBP12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 NKRFO15226 690 aaKnown RBP eCLIP12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 GAS2O43903 313 aaKnown RBP12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 KCNA2P16389 499 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 RAP1GAPP47736 663 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 SULT1E1P49888 294 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 JAG1P78504 1218 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 PTPN11Q06124 597 aaPredicted RBP12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 GOLGA7BQ2TAP0 167 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 MPZL3Q6UWV2 235 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 CCDC81Q6ZN84 652 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 BNIPLQ7Z465 357 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 OR6P1Q8NGX9 317 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 CKAP2Q8WWK9 683 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 PCDHB18PQ96TA0 734 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 CNPY3Q9BT09 278 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 FRMD8P1Q9BZ68 369 aaPredicted RBP12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 SAE1Q9UBE0 346 aaPredicted RBP12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 SCN4AP35499 1836 aa12.46□□□□□ -0.41
TSPAN9-201ENST00000011898 FSCN2O14926 492 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 NDUFB5O43674 189 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 HOXD10P28358 340 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 TPI1P60174 286 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 HABP4Q5JVS0 413 aaKnown RBP12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 ANO7Q6IWH7 933 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 LAYNQ6UX15 382 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 PRUNE1Q86TP1 453 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 SLC26A11Q86WA9 606 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 RXFP2Q8WXD0 754 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 ART4Q93070 314 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 CNDP1Q96KN2 507 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 BBS2Q9BXC9 721 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 ZNF646O15015 1829 aaPredicted RBP12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 CHKAP35790 457 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 ELK3P41970 407 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 CLCN2P51788 898 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 AKR1D1P51857 326 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 BLVRAP53004 296 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 CDH8P55286 799 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 ARPP19P56211 112 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 KDELC2Q7Z4H8 507 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 VSIG10LQ86VR7 867 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 CCDC60Q8IWA6 550 aaPredicted RBP12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 SCN4BQ8IWT1 228 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 KATNAL2Q8IYT4 538 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 DEFB107AQ8IZN7 70 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 KREMEN1Q96MU8 473 aa12.46□□□□□ -0.42
TSPAN9-201ENST00000011898 TAGLN3Q9UI15 199 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms