RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 ZNF510Q9Y2H8 683 aa10.64□□□□□ -0.71
NIPAL3-201ENST00000003912 TCP11X1B4DZS4 312 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 EIF3HO15372 352 aaKnown RBP eCLIP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 PEX10O60683 326 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 EEF1B2P24534 225 aaKnown RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 HSP90AA5PQ58FG0 334 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 FOXR2Q6PJQ5 311 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 HJURPQ8NCD3 748 aaPredicted RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 OR5B17Q8NGF7 314 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 PPP1R36Q96LQ0 422 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 MFSD14AQ96MC6 490 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 UBP1Q9NZI7 540 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 KIF17Q9P2E2 1029 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 OR12D3Q9UGF7 316 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 FAM153AQ9UHL3 310 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 BRCC3P46736 316 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 SH3BGRP55822 239 aaPredicted RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 CUL3Q13618 768 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 RBM23Q86U06 439 aaKnown RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 GLIS3Q8NEA6 775 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 EPS8L1Q8TE68 723 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 PRMT1Q99873 361 aaKnown RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 FUCA2Q9BTY2 467 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 COPS7BQ9H9Q2 264 aaPredicted RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 THEGQ9P2T0 379 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 PCDHA3Q9Y5H8 950 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 CNTNAP1P78357 1384 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 A0A0B4J269 797 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 B4GALT4O60513 344 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 AOC2O75106 756 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 NPY2RP49146 381 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 SLC29A2Q14542 456 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 SLC45A4Q5BKX6 768 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 ZC3H12AQ5D1E8 599 aaKnown RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 SPATA21Q7Z572 469 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 NPAS4Q8IUM7 802 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 KLF6Q99612 283 aaPredicted RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 LACRTQ9GZZ8 138 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 C11orf49Q9H6J7 331 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 COL20A1Q9P218 1284 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 MORC2Q9Y6X9 1032 aaPredicted RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 AHDC1Q5TGY3 1603 aaPredicted RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 SMIM28A0A1B0GU29 152 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 ZNF7P17097 686 aaPredicted RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 PTPN3P26045 913 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 SNRPD1P62314 119 aaKnown RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 ITGA9Q13797 1035 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 PAPD7Q5XG87 772 aaKnown RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 LRRC8EQ6NSJ5 796 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 USP45Q70EL2 814 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 TNFRSF25Q93038 417 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 OMDQ99983 421 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 RAD18Q9NS91 495 aa10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 ZNF142P52746 1687 aaPredicted RBP10.63□□□□□ -0.71
NIPAL3-201ENST00000003912 CHN1P15882 459 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 HPCAP84074 193 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 TP53BP2Q13625 1128 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 RAP1GAP2Q684P5 730 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 LRRC55Q6ZSA7 311 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 PCYOX1LQ8NBM8 494 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 E2F7Q96AV8 911 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 TSEN34Q9BSV6 310 aaKnown RBP10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 SPASTQ9UBP0 616 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 FBXO10Q9UK96 956 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 TRPC5OSA6NMA1 111 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 C1QTNF3-AMACRE9PGA6 284 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 O00370 1275 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 RBP1P09455 135 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 ALOX15P16050 662 aaPredicted RBP10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 ARL2P36404 184 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 ZNF143P52747 638 aaPredicted RBP10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 ALDH18A1P54886 795 aaKnown RBP10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 FAM183BPQ6ZVS7 135 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 STRA8Q7Z7C7 330 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 FAM35AQ86V20 835 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 SUGP1Q8IWZ8 645 aaKnown RBP10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 TMEM159Q96B96 161 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 MRPL1Q9BYD6 325 aaKnown RBP10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 ZCCHC17Q9NP64 241 aaKnown RBP10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 CNGB3Q9NQW8 809 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 LRRC37A3O60309 1634 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 RGPD8O14715 1765 aaPredicted RBP10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 PDZK1P1A8MUH7 402 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 XPO1O14980 1071 aaKnown RBP10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 CYP3A5P20815 502 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 PRKCIP41743 596 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 ACLYP53396 1101 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 TGM3Q08188 693 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 MGAT5Q09328 741 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 MPP3Q13368 585 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 VSTM1Q6UX27 236 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 DENND1CQ8IV53 801 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 FAM71AQ8IYT1 594 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 KAT2BQ92831 832 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 SGF29Q96ES7 293 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 DUSP16Q9BY84 665 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 DHX33Q9H6R0 707 aaKnown RBP10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 EVA1BQ9NVM1 165 aa10.62□□□□□ -0.71
NIPAL3-201ENST00000003912 Q9Y3F1 56 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms