RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Hspa9P38647 679 aaKnown RBP21.93■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Cpa4Q6P8K8 420 aa21.93■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Hspbap1Q8BK58 483 aa21.93■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Bicd1Q8BR07 835 aa21.93■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 BoraQ8BS90 525 aa21.93■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Barhl2Q8VIB5 384 aa21.93■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Usp3Q91W36 520 aaKnown RBP21.93■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Abcg3Q99P81 650 aa21.93■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Bace2Q9JL18 514 aa21.93■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Gpr161B2RPY5 545 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Pcdh9F8VPK8 1237 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Apobec1P51908 229 aaKnown RBP21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 YwhaqP68254 245 aaKnown RBP21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 CkbQ04447 381 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Plcl1Q3USB7 1096 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Tmx4Q8C0L0 335 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ccdc71Q8VEG0 433 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Tsnaxip1Q99P25 704 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Thg1lQ9CY52 298 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Tspan17Q9D7W4 270 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 GatmQ9D964 423 aaKnown RBP21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Chmp2aQ9DB34 222 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 PnkpQ9JLV6 522 aaKnown RBP21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Baz2aQ91YE5 1889 aaKnown RBP21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 4930426L09RikE9Q0N7 123 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 E230025N22RikG5E8S3 482 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Olfr1022L7MTT3 315 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 TertO70372 1122 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Pdk4O70571 412 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Fgf18O89101 207 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rab20P35295 233 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Stat5aP42230 793 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 GsrP47791 500 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Dynlt1P51807 113 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Wfs1P56695 890 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ctnnb1Q02248 781 aaKnown RBP21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Myadml2Q08AU7 307 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rgs9bpQ148R9 237 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Sec23ipQ6NZC7 998 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rxfp1Q6R6I7 758 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Olfr867Q7TRF3 331 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Thnsl1Q8BH55 747 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Nrip1Q8CBD1 1161 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Spdye4bQ8CDE8 236 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Znf622Q91VY9 476 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Gps1Q99LD4 471 aaKnown RBP21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 MlxiplQ99MZ3 864 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Fbxo32Q9CPU7 355 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Snf8Q9CZ28 258 aa21.92■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Fam209A2APA5 170 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rhox3cA2AWM0 215 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rhox3hL7MU37 215 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Smpd2O70572 419 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Nudt1P53368 156 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 FaxcQ3UMF9 409 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Afg1lQ3V384 480 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rhox3aQ4TU90 215 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Soat1Q61263 540 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 4921504E06RikQ8CET2 560 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Dennd1aQ8K382 1016 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Smc6Q924W5 1097 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Vwa7Q9JHA8 891 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Klrc2Q9WTJ9 238 aa21.91■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Vmn2r72D3Z4N8 856 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Wdr95D3Z7A8 784 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Gm5795E9PZN8 263 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Gdap1O88741 358 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Yme1l1O88967 715 aaKnown RBP21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ccl5P30882 91 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Aff3P51827 1254 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Emilin3P59900 758 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Tas2r102Q7M717 329 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Olfr1198Q7TR12 308 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Olfr1057Q7TR75 315 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 PdhxQ8BKZ9 501 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Wdr59Q8C0M0 992 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ccdc159Q8C963 411 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Fbxo21Q8VDH1 627 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Zfp617Q91WM0 559 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rab30Q923S9 203 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Pdxdc1Q99K01 787 aaKnown RBP21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Calr3Q9D9Q6 380 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Tsc1Q9EP53 1161 aa21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Noc2lQ9WV70 747 aaKnown RBP21.9■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Trim30cD3YVI9 513 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 4930558K02RikE0CXC6 182 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 CopeO89079 308 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 SykP48025 629 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 InscQ3HNM7 579 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Brms1lQ3U1T3 323 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Skap2Q3UND0 358 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Grxcr1Q50H32 290 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Zfp512bQ6PHP4 879 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Mis18bp1Q80WQ8 998 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Nod1Q8BHB0 953 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Nipal4Q8BZF2 406 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 CgasQ8C6L5 507 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ifi205aQ8CGE8 404 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 FdpsQ920E5 353 aa21.89■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 ArskQ9D2L1 553 aa21.89■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms