RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Fam151aQ8QZW3 608 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Znf426Q8R1D1 550 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Pofut2Q8VHI3 429 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Dhx36Q8VHK9 1001 aaKnown RBP18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Mageb3Q9D2H4 330 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Dusp6Q9DBB1 381 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Pcsk1nQ9QXV0 258 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Foxe3Q9QY14 288 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Zfr2E9Q5M4 874 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Zbtb11G5E8B9 1050 aaKnown RBP18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Fzd1O70421 642 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 IapP03975 557 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Glb1P23780 647 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Stmn2P55821 179 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Echdc2Q3TLP5 296 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Mks1Q5SW45 561 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Trim38Q5SZ99 471 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Inppl1Q6P549 1257 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Tas2r109Q7M707 316 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Tas2r102Q7M717 329 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Fam163bQ8BUM6 167 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Taf5Q8C092 801 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Adgrg2Q8CJ12 1009 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Coq6Q8R1S0 476 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 DolkQ8R2Y3 534 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Prl2a1Q9JHK0 228 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Rap1gapA2ALS5 663 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Gm6133B2RY53 190 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Zc3h12bG3X9I7 835 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 UmpsP13439 481 aaKnown RBP18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Dynlt1P51807 113 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Atp5bP56480 529 aaKnown RBP18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Kpnb1P70168 876 aaKnown RBP18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ksr1Q61097 873 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Bnip1Q6QD59 228 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Trpm4Q7TN37 1213 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Rcn2Q8BP92 320 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 TdrpQ8C5P7 182 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Akirin1Q99LF1 191 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Gdap2Q9DBL2 498 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Vwa7Q9JHA8 891 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ptpn4Q9WU22 926 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Speer3W4VSP1 261 aa18.87■□□□□ 0.61
Trim47-202ENSMUST00000106441 Pdia2D3Z6P0 527 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Cdr1E9Q0B4 517 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Rab6bP61294 208 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 YwhazP63101 245 aaKnown RBP18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Msx3P70354 204 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Epas1P97481 874 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 CttnQ60598 546 aaKnown RBP18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ip6k2Q80V72 448 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Sbk1Q8QZX0 417 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Actrt1Q9D9J3 376 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 HnrnpcQ9Z204 313 aaKnown RBP18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Gm45861A0A1B0GRY3 1923 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ms4a14A0A087WSD2 1232 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Tatdn2B7ZNL9 783 aaKnown RBP18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Gm10250G3X9L6 160 aaKnown RBP18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 ItgavP43406 1044 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Scarf2P59222 833 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Marveld2Q3UZP0 555 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ubxn7Q6P5G6 467 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 PoliQ6R3M4 717 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Fam102aQ78T81 392 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Exoc3l1Q8BI71 739 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Dcun1d2Q8BZJ7 259 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Kcnv1Q8BZN2 503 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Stau2Q8CJ67 570 aaKnown RBP18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Rnf112Q96DY5 654 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Fam90a1bQ9D4F3 419 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Oma1Q9D8H7 521 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Rnf138rt1Q9D9M9 248 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Atp5hQ9DCX2 161 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Asb1Q9WV74 336 aa18.86■□□□□ 0.61
Trim47-202ENSMUST00000106441 Igkv10-96A0A140T8M1 115 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Kpna7C0LLJ0 499 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ldlrad1D3YYZ1 218 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Vmn2r103E9PWW0 856 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Hsd17b14E9Q3D4 273 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Gm20509G3UZF1 325 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Galnt4O08832 578 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Il3P01586 166 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Impdh2P24547 514 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 S100a5P63084 93 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Dlg3P70175 849 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Als2clQ60I26 952 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Map3k7Q62073 579 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Rpf1Q7TND5 349 aaKnown RBP18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Slc9a4Q8BUE1 797 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ldlrap1Q8C142 308 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Tdrd7Q8K1H1 1086 aaKnown RBP18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 1700123K08RikQ9D991 295 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Scyl1Q9EQC5 806 aaKnown RBP18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Supt3B0QZW4 406 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Gimd1E9PW74 217 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Soat2O88908 525 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 PrkcdP28867 674 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Grm6Q5NCH9 871 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ankrd6Q69ZU8 712 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Gpatch2lQ6PE65 482 aa18.85■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms