RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 EXOC3L4Q17RC7 722 aa26.32■■□□□ 1.8
VEGFA-232ENST00000640653 AASDHQ4L235 1098 aaPredicted RBP26.32■■□□□ 1.8
VEGFA-232ENST00000640653 PLA2G2CQ5R387 149 aa26.32■■□□□ 1.8
VEGFA-232ENST00000640653 PMS2CLQ68D20 193 aa26.32■■□□□ 1.8
VEGFA-232ENST00000640653 MSANTD2Q6P1R3 559 aa26.32■■□□□ 1.8
VEGFA-232ENST00000640653 IRF2BP1Q8IU81 584 aa26.32■■□□□ 1.8
VEGFA-232ENST00000640653 FAM114A1Q8IWE2 563 aa26.32■■□□□ 1.8
VEGFA-232ENST00000640653 DDI1Q8WTU0 396 aa26.32■■□□□ 1.8
VEGFA-232ENST00000640653 THAP9Q9H5L6 903 aa26.32■■□□□ 1.8
VEGFA-232ENST00000640653 APEX2Q9UBZ4 518 aa26.32■■□□□ 1.8
VEGFA-232ENST00000640653 SART1O43290 800 aaKnown RBP26.31■■□□□ 1.8
VEGFA-232ENST00000640653 LATS1O95835 1130 aa26.31■■□□□ 1.8
VEGFA-232ENST00000640653 SLC9A1P19634 815 aa26.31■■□□□ 1.8
VEGFA-232ENST00000640653 P2RY2P41231 377 aa26.31■■□□□ 1.8
VEGFA-232ENST00000640653 WASP42768 502 aa26.31■■□□□ 1.8
VEGFA-232ENST00000640653 ACADSBP45954 432 aa26.31■■□□□ 1.8
VEGFA-232ENST00000640653 ZNF445P59923 1031 aa26.31■■□□□ 1.8
VEGFA-232ENST00000640653 CREB5Q02930 508 aa26.31■■□□□ 1.8
VEGFA-232ENST00000640653 CLEC4CQ8WTT0 213 aa26.31■■□□□ 1.8
VEGFA-232ENST00000640653 P2RY11Q96G91 374 aa26.31■■□□□ 1.8
VEGFA-232ENST00000640653 MIS12Q9H081 205 aa26.31■■□□□ 1.8
VEGFA-232ENST00000640653 ST7Q9NRC1 585 aa26.31■■□□□ 1.8
VEGFA-232ENST00000640653 VPS45Q9NRW7 570 aa26.31■■□□□ 1.8
VEGFA-232ENST00000640653 GFRA2O00451 464 aa26.3■■□□□ 1.8
VEGFA-232ENST00000640653 MSI1O43347 362 aaKnown RBP26.3■■□□□ 1.8
VEGFA-232ENST00000640653 LETM1O95202 739 aaPredicted RBP26.3■■□□□ 1.8
VEGFA-232ENST00000640653 BCKDHBP21953 392 aa26.3■■□□□ 1.8
VEGFA-232ENST00000640653 GNA15P30679 374 aa26.3■■□□□ 1.8
VEGFA-232ENST00000640653 GPD2P43304 727 aa26.3■■□□□ 1.8
VEGFA-232ENST00000640653 E2F5Q15329 346 aa26.3■■□□□ 1.8
VEGFA-232ENST00000640653 SF3A2Q15428 464 aaKnown RBP26.3■■□□□ 1.8
VEGFA-232ENST00000640653 MPPE1Q53F39 396 aa26.3■■□□□ 1.8
VEGFA-232ENST00000640653 CLEC17AQ6ZS10 378 aa26.3■■□□□ 1.8
VEGFA-232ENST00000640653 ACOX2Q99424 681 aa26.3■■□□□ 1.8
VEGFA-232ENST00000640653 GABRG3Q99928 467 aa26.3■■□□□ 1.8
VEGFA-232ENST00000640653 SLC2A11Q9BYW1 496 aa26.3■■□□□ 1.8
VEGFA-232ENST00000640653 A0A1W2PQF6 199 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 BCLAF3A2AJT9 711 aaKnown RBP26.29■■□□□ 1.8
VEGFA-232ENST00000640653 SLC30A4O14863 429 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 MAP3K13O43283 966 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 THAP12O43422 761 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 ERCC5P28715 1186 aaPredicted RBP26.29■■□□□ 1.8
VEGFA-232ENST00000640653 RPL34P49207 117 aaKnown RBP26.29■■□□□ 1.8
VEGFA-232ENST00000640653 MAN2A1Q16706 1144 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 ARHGAP44Q17R89 818 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 DPCR1Q3MIW9 517 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 DENND1BQ6P3S1 775 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 GJB7Q6PEY0 223 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 ANKS1BQ7Z6G8 1248 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 STK32AQ8WU08 396 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 UCMAQ8WVF2 138 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 ZNF606Q8WXB4 792 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 RLN3Q8WXF3 142 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 STOML2Q9UJZ1 356 aa26.29■■□□□ 1.8
VEGFA-232ENST00000640653 DNAH14Q0VDD8 3507 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 RALGAPA1Q6GYQ0 2036 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 NPC1O15118 1278 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 GDF9O60383 454 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 CAVIN2O95810 425 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 GABRG2P18507 467 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 USP8P40818 1118 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 ADGRF1Q5T601 910 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 NUGGCQ68CJ6 796 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 SMYD5Q6GMV2 418 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 LPCAT2Q7L5N7 544 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 UNC45BQ8IWX7 931 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 IPO4Q8TEX9 1081 aaKnown RBP26.28■■□□□ 1.8
VEGFA-232ENST00000640653 TRIM62Q9BVG3 475 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 CACNA2D2Q9NY47 1150 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 SPAG17Q6Q759 2223 aa26.28■■□□□ 1.8
VEGFA-232ENST00000640653 NCAM1P13591 858 aa26.27■■□□□ 1.8
VEGFA-232ENST00000640653 PON1P27169 355 aa26.27■■□□□ 1.8
VEGFA-232ENST00000640653 GEN1Q17RS7 908 aa26.27■■□□□ 1.8
VEGFA-232ENST00000640653 MAP7D1Q3KQU3 841 aa26.27■■□□□ 1.8
VEGFA-232ENST00000640653 SCUBE3Q8IX30 993 aa26.27■■□□□ 1.8
VEGFA-232ENST00000640653 FAM149B1Q96BN6 582 aa26.27■■□□□ 1.8
VEGFA-232ENST00000640653 PIWIL1Q96J94 861 aaKnown RBP26.27■■□□□ 1.8
VEGFA-232ENST00000640653 TSPAN3O60637 253 aa26.26■■□□□ 1.79
VEGFA-232ENST00000640653 IGLV3-27P01718 113 aa26.26■■□□□ 1.79
VEGFA-232ENST00000640653 PRKCSHP14314 528 aaPredicted RBP26.26■■□□□ 1.79
VEGFA-232ENST00000640653 SLC11A2P49281 568 aa26.26■■□□□ 1.79
VEGFA-232ENST00000640653 DHPSP49366 369 aaPredicted RBP26.26■■□□□ 1.79
VEGFA-232ENST00000640653 LIMK1P53667 647 aa26.26■■□□□ 1.79
VEGFA-232ENST00000640653 TBX4P57082 545 aa26.26■■□□□ 1.79
VEGFA-232ENST00000640653 RING1Q06587 406 aa26.26■■□□□ 1.79
VEGFA-232ENST00000640653 EIF4HQ15056 248 aaKnown RBP26.26■■□□□ 1.79
VEGFA-232ENST00000640653 CYP2U1Q7Z449 544 aa26.26■■□□□ 1.79
VEGFA-232ENST00000640653 SHC3Q92529 594 aa26.26■■□□□ 1.79
VEGFA-232ENST00000640653 TMA16Q96EY4 203 aaKnown RBP26.26■■□□□ 1.79
VEGFA-232ENST00000640653 SLC4A5Q9BY07 1137 aa26.26■■□□□ 1.79
VEGFA-232ENST00000640653 SMOC1Q9H4F8 434 aa26.26■■□□□ 1.79
VEGFA-232ENST00000640653 LMBRD1Q9NUN5 540 aa26.26■■□□□ 1.79
VEGFA-232ENST00000640653 CALCOCO1Q9P1Z2 691 aa26.26■■□□□ 1.79
VEGFA-232ENST00000640653 BECN2A8MW95 431 aa26.25■■□□□ 1.79
VEGFA-232ENST00000640653 HOXD9P28356 352 aaPredicted RBP26.25■■□□□ 1.79
VEGFA-232ENST00000640653 APBA1Q02410 837 aa26.25■■□□□ 1.79
VEGFA-232ENST00000640653 NNTQ13423 1086 aa26.25■■□□□ 1.79
VEGFA-232ENST00000640653 STARD3Q14849 445 aa26.25■■□□□ 1.79
VEGFA-232ENST00000640653 CT47A1Q5JQC4 288 aaPredicted RBP26.25■■□□□ 1.79
VEGFA-232ENST00000640653 SPDYCQ5MJ68 293 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms