RNA–Protein interactions for RNA: ENST00000638682.1

LINC02001-202, Transcript of long intergenic non-protein coding RNA 2001, humanhuman

TSL 5 BASIC

Gene LINC02001, Length 1,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02001-202ENST00000638682 FOXC1Q12948 553 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 SNX1Q13596 522 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 KRT81Q14533 505 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 PUS10Q3MIT2 529 aaKnown RBP11.63□□□□□ -0.55
LINC02001-202ENST00000638682 TCEAL5Q5H9L2 206 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 OTUD1Q5VV17 481 aaPredicted RBP11.63□□□□□ -0.55
LINC02001-202ENST00000638682 SYPL2Q5VXT5 272 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 CCNI2Q6ZMN8 369 aaPredicted RBP11.63□□□□□ -0.55
LINC02001-202ENST00000638682 RFX6Q8HWS3 928 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 SLC39A11Q8N1S5 342 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 SCAMP5Q8TAC9 235 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 SPPL3Q8TCT6 385 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 POF1BQ8WVV4 589 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 HNRNPLLQ8WVV9 542 aaKnown RBP11.63□□□□□ -0.55
LINC02001-202ENST00000638682 CASKIN2Q8WXE0 1202 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 ATG4AQ8WYN0 398 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 RIN2Q8WYP3 895 aaPredicted RBP11.63□□□□□ -0.55
LINC02001-202ENST00000638682 PPP2R3CQ969Q6 453 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 TMEM169Q96HH4 297 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 TRIM51Q9BSJ1 452 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 SNRNP25Q9BV90 132 aaKnown RBP11.63□□□□□ -0.55
LINC02001-202ENST00000638682 CALN1Q9BXU9 219 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 ARFGAP3Q9NP61 516 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 ENTPD7Q9NQZ7 604 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 GDF3Q9NR23 364 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 TLR9Q9NR96 1032 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 HOMER3Q9NSC5 361 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 GPATCH2LQ9NWQ4 482 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 PCYOX1Q9UHG3 505 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 NAALADL1Q9UQQ1 740 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 EFR3BQ9Y2G0 817 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 USP3Q9Y6I4 520 aa11.63□□□□□ -0.55
LINC02001-202ENST00000638682 ESYT3A0FGR9 886 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 MTMR11A4FU01 709 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 M0QYT0 321 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 MDM4O15151 490 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 ST8SIA5O15466 376 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 ENDOD1O94919 500 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 SEC31AO94979 1220 aaKnown RBP11.62□□□□□ -0.55
LINC02001-202ENST00000638682 DNAJB1P25685 340 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 KCNJ1P48048 391 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 RPIAP49247 311 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 GPR15P49685 360 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 ARSEP51690 589 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 SLC5A3P53794 718 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 PITX1P78337 314 aaPredicted RBP11.62□□□□□ -0.55
LINC02001-202ENST00000638682 KRT17Q04695 432 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 DEUP1Q05D60 604 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 ADCY2Q08462 1091 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 SMARCB1Q12824 385 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 GPR17Q13304 367 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 PDK2Q15119 407 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 PSMD5Q16401 504 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 CCNG2Q16589 344 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 DDR2Q16832 855 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 MAP9Q49MG5 647 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 ZC3H12AQ5D1E8 599 aaKnown RBP11.62□□□□□ -0.55
LINC02001-202ENST00000638682 KIAA1841Q6NSI8 718 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 RNF19BQ6ZMZ0 732 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 JAMLQ86YT9 394 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 GSPT2Q8IYD1 628 aaKnown RBP11.62□□□□□ -0.55
LINC02001-202ENST00000638682 CCDC105Q8IYK2 499 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 RNF168Q8IYW5 571 aaPredicted RBP11.62□□□□□ -0.55
LINC02001-202ENST00000638682 TTC9BQ8N6N2 239 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 ATAD1Q8NBU5 361 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 SLC7A14Q8TBB6 771 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 SPPL2BQ8TCT7 592 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 IFT81Q8WYA0 676 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 PIK3R5Q8WYR1 880 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 NT5C3BQ969T7 300 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 C8orf48Q96LL4 319 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 HERC2P3Q9BVR0 1158 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 RAB17Q9H0T7 212 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 PRDM6Q9NQX0 595 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 RRN3Q9NYV6 651 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 CALCOCO1Q9P1Z2 691 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 MTRRQ9UBK8 725 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 RASAL2Q9UJF2 1139 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 LZTS1Q9Y250 596 aa11.62□□□□□ -0.55
LINC02001-202ENST00000638682 SYNJ2BP-COX16A0A087WUM0 186 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 VNN2O95498 520 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 SOD2P04179 222 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 NCAM1P13591 858 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 CA8P35219 290 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 RDXP35241 583 aaKnown RBP11.61□□□□□ -0.55
LINC02001-202ENST00000638682 CARSP49589 748 aaKnown RBP11.61□□□□□ -0.55
LINC02001-202ENST00000638682 YWHAGP61981 247 aaKnown RBP eCLIP11.61□□□□□ -0.55
LINC02001-202ENST00000638682 DYNLT1P63172 113 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 NME3Q13232 169 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 DPYSL3Q14195 570 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 CA9Q16790 459 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 ERMARDQ5T6L9 678 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 SDHAF4Q5VUM1 108 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 PLPP4Q5VZY2 271 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 BSPRYQ5W0U4 402 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 BBS12Q6ZW61 710 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 BNIPLQ7Z465 357 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 FAM131BQ86XD5 332 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 MAP7D3Q8IWC1 876 aa11.61□□□□□ -0.55
LINC02001-202ENST00000638682 NUP93Q8N1F7 819 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms