RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 ZC3H10Q96K80 434 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 TUBGCP2Q9BSJ2 902 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 DUSP15Q9H1R2 295 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 ARRDC1-AS1Q9H2J1 176 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 NDST4Q9H3R1 872 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 HCN2Q9UL51 889 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 PRR5-ARHGAP8B1AHC4 643 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 PES1O00541 588 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 RHOBTB1O94844 696 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 EPN2O95208 641 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 ARHGAP8P85298 464 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 CSRP2Q16527 193 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 MEA1Q16626 185 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 VWA3BQ502W6 1294 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 SDE2Q6IQ49 451 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 SCUBE3Q8IX30 993 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 FAM217AQ8IXS0 508 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 PGBD3Q8N328 593 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 DDI1Q8WTU0 396 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 SHC3Q92529 594 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 FAM149B1Q96BN6 582 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 ACOX2Q99424 681 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 FBXO10Q9UK96 956 aa17.48■□□□□ 0.39
CACNA1A-259ENST00000638114 KCNJ18B7U540 433 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 GOLGA6L22H0YM25 854 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 SART1O43290 800 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 TSPAN3O60637 253 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 NCAM1P13591 858 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 RPL34P49207 117 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 KCNJ12Q14500 433 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 PUM1Q14671 1186 aaKnown RBP eCLIP17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 CCDC6Q16204 474 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 MIIPQ5JXC2 388 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 PRR23CQ6ZRP0 262 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 C11orf74Q86VG3 221 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 GPT2Q8TD30 523 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 STK32AQ8WU08 396 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 SLC4A5Q9BY07 1137 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 SIX2Q9NPC8 291 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 SAMSN1Q9NSI8 373 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 CYTH4Q9UIA0 394 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 DNAJC12Q9UKB3 198 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 AJAP1Q9UKB5 411 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 CDV3Q9UKY7 258 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 SLC27A6Q9Y2P4 619 aa17.47■□□□□ 0.39
CACNA1A-259ENST00000638114 E5RJQ4 531 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 LATS1O95835 1130 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 SDHBP21912 280 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 BCKDHBP21953 392 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 TBX4P57082 545 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 ZNF445P59923 1031 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 GEN1Q17RS7 908 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 MPPE1Q53F39 396 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 CT47A1Q5JQC4 288 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 OLIG1Q8TAK6 271 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 RLN3Q8WXF3 142 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 ERLEC1Q96DZ1 483 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 SPACA7Q96KW9 195 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 CACNA2D2Q9NY47 1150 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 DLL3Q9NYJ7 618 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 CLEC4EQ9ULY5 219 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 PCDHGA5Q9Y5G8 931 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 DCHS1Q96JQ0 3298 aa17.46■□□□□ 0.39
CACNA1A-259ENST00000638114 ABCA7Q8IZY2 2146 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 CAPN9O14815 690 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 ZBTB24O43167 697 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 IGLV3-27P01718 113 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 FYNP06241 537 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 GABRG2P18507 467 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 MPLP40238 635 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 P2RY2P41231 377 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 SLC11A2P49281 568 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 PTK2Q05397 1052 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 PDCLQ13371 301 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 SF3A2Q15428 464 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 ADGRF1Q5T601 910 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 NUGGCQ68CJ6 796 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 DGLUCYQ7Z3D6 616 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 ANKS1BQ7Z6G8 1248 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 PASD1Q8IV76 773 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 UNC45BQ8IWX7 931 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 C12orf50Q8NA57 414 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 DQX1Q8TE96 717 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 SERPINB11Q96P15 392 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 TRIM62Q9BVG3 475 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 SLC2A11Q9BYW1 496 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 STOML2Q9UJZ1 356 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 NAALADL1Q9UQQ1 740 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 NFE2L3Q9Y4A8 694 aa17.45■□□□□ 0.38
CACNA1A-259ENST00000638114 THADAQ6YHU6 1953 aa17.44■□□□□ 0.38
CACNA1A-259ENST00000638114 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-259ENST00000638114 A0A1W2PQF6 199 aa17.44■□□□□ 0.38
CACNA1A-259ENST00000638114 FOXN3O00409 490 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-259ENST00000638114 PAPSS1O43252 624 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-259ENST00000638114 MAP3K13O43283 966 aa17.44■□□□□ 0.38
CACNA1A-259ENST00000638114 FOXD2O60548 495 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-259ENST00000638114 PNMA6AP0CW24 399 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-259ENST00000638114 EEF1GP26641 437 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-259ENST00000638114 HOXD9P28356 352 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms