RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 C18orf8Q96DM3 657 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 FAM120BQ96EK7 910 aaKnown RBP3.17□□□□□ -1.9
VIM-210ENST00000637053 C19orf60Q96EN9 201 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 SGF29Q96ES7 293 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 THOC1Q96FV9 657 aaKnown RBP3.17□□□□□ -1.9
VIM-210ENST00000637053 APIPQ96GX9 242 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 ART5Q96L15 291 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 MAGEB10Q96LZ2 347 aaPredicted RBP3.17□□□□□ -1.9
VIM-210ENST00000637053 ADAD1Q96M93 576 aaKnown RBP3.17□□□□□ -1.9
VIM-210ENST00000637053 PRICKLE1Q96MT3 831 aaPredicted RBP3.17□□□□□ -1.9
VIM-210ENST00000637053 PSKH2Q96QS6 385 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 MPHOSPH9Q99550 1183 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 SIKE1Q9BRV8 207 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 THUMPD3Q9BV44 507 aaKnown RBP3.17□□□□□ -1.9
VIM-210ENST00000637053 PACSIN1Q9BY11 444 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 ITPAQ9BY32 194 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 NFKBIZQ9BYH8 718 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 STK33Q9BYT3 514 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 CD244Q9BZW8 370 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 AP5M1Q9H0R1 490 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 HSD3B7Q9H2F3 369 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 NDST4Q9H3R1 872 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 DENND2DQ9H6A0 471 aaPredicted RBP3.17□□□□□ -1.9
VIM-210ENST00000637053 NOL6Q9H6R4 1146 aaKnown RBP3.17□□□□□ -1.9
VIM-210ENST00000637053 TTC12Q9H892 705 aaPredicted RBP3.17□□□□□ -1.9
VIM-210ENST00000637053 GORASP2Q9H8Y8 452 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 PSTPIP2Q9H939 334 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 ERVK-5Q9HDB9 667 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 SLC35D1Q9NTN3 355 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 GDAP2Q9NXN4 497 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 C11orf21Q9P2W6 132 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 MORF4L1Q9UBU8 362 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 REV1Q9UBZ9 1251 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 KLHL3Q9UH77 587 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 ANAPC5Q9UJX4 755 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 FEM1BQ9UK73 627 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 ZNF215Q9UL58 517 aaPredicted RBP3.17□□□□□ -1.9
VIM-210ENST00000637053 KLHL20Q9Y2M5 609 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 POLR3KQ9Y2Y1 108 aaPredicted RBP3.17□□□□□ -1.9
VIM-210ENST00000637053 CLDN16Q9Y5I7 305 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 TNFRSF18Q9Y5U5 241 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 GMEB1Q9Y692 573 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 PRR36Q9H6K5 1346 aa3.17□□□□□ -1.9
VIM-210ENST00000637053 MAGEB16A2A368 324 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 EME2A4GXA9 379 aaPredicted RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 NCF1BA6NI72 391 aaPredicted RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 OR6C65A6NJZ3 312 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 NCF1CA8MVU1 366 aaPredicted RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 H0YCG3 227 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 H0YIN7 160 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 STX16-NPEPL1H3BU86 382 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 APOL1O14791 398 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ARHGAP6O43182 974 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ZW10O43264 779 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ADAM20O43506 726 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 RECQL4O94761 1208 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 UBOX5O94941 541 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 GCNT3O95395 438 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 GGPS1O95749 300 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 A1BGP04217 495 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ALDH2P05091 517 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 GJB1P08034 283 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 CSF1P09603 554 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 UBTFL6P0CB48 400 aaPredicted RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 ACRP10323 421 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 PRG2P13727 222 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 JUPP14923 745 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 TYMPP19971 482 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ENDOUP21128 410 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 C5AR1P21730 350 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 GALP22466 123 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 TBXAS1P24557 533 aaPredicted RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 CCR1P32246 355 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 RPL9P32969 192 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 SLC16A2P36021 539 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 GP5P40197 560 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 EIF2DP41214 584 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 WNT5AP41221 380 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 CTSKP43235 329 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 RABIFP47224 123 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ARCN1P48444 511 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 GCLCP48506 637 aaPredicted RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 CLCN4P51793 760 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 SLC8A3P57103 927 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 EIF4A1P60842 406 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 TRA2BP62995 288 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 YWHAZP63104 245 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 CSNK2BP67870 215 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 RPP38P78345 283 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 OLR1P78380 273 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 OCRLQ01968 901 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ALDH6A1Q02252 535 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 UBE3AQ05086 875 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 EPS8Q12929 822 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 CHIT1Q13231 466 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 HNRNPDQ14103 355 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 TRIM25Q14258 630 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 SQLEQ14534 574 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 PFKFB3Q16875 520 aaPredicted RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 LETM2Q2VYF4 491 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms