RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 MPPE1Q53F39 396 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 FYB2Q5VWT5 728 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 PMF1Q6P1K2 205 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 BHLHA9Q7RTU4 235 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 FAM114A1Q8IWE2 563 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 SLC2A11Q9BYW1 496 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 ST7Q9NRC1 585 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 SFMBT1Q9UHJ3 866 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 DACH1Q9UI36 760 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 FBXO10Q9UK96 956 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 DCDC2BA2VCK2 349 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 PIK3R2O00459 728 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 GDF9O60383 454 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 LTFP02788 710 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 DPP6P42658 865 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 ZNF132P52740 706 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 LIMK1P53667 647 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 ARID5AQ03989 594 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 STARD3Q14849 445 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 SLC36A4Q6YBV0 504 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 GBP6Q6ZN66 633 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 ANKS1BQ7Z6G8 1248 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 UNC45BQ8IWX7 931 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 RLN3Q8WXF3 142 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 TRIM62Q9BVG3 475 aa19.79■□□□□ 0.76
CLN6-213ENST00000636212 WDR87Q6ZQQ6 2873 aa19.78■□□□□ 0.76
CLN6-213ENST00000636212 SPAG17Q6Q759 2223 aa19.78■□□□□ 0.76
CLN6-213ENST00000636212 AP5Z1O43299 807 aa19.78■□□□□ 0.76
CLN6-213ENST00000636212 ZNF217O75362 1048 aa19.78■□□□□ 0.76
CLN6-213ENST00000636212 BCKDHBP21953 392 aa19.78■□□□□ 0.76
CLN6-213ENST00000636212 SPDYCQ5MJ68 293 aa19.78■□□□□ 0.76
CLN6-213ENST00000636212 IPO4Q8TEX9 1081 aaKnown RBP19.78■□□□□ 0.76
CLN6-213ENST00000636212 KREMEN1Q96MU8 473 aa19.78■□□□□ 0.76
CLN6-213ENST00000636212 GABRG3Q99928 467 aa19.78■□□□□ 0.76
CLN6-213ENST00000636212 MIS12Q9H081 205 aa19.78■□□□□ 0.76
CLN6-213ENST00000636212 CLSTN2Q9H4D0 955 aa19.78■□□□□ 0.76
CLN6-213ENST00000636212 CACNA2D2Q9NY47 1150 aa19.78■□□□□ 0.76
CLN6-213ENST00000636212 CNTN6Q9UQ52 1028 aa19.78■□□□□ 0.76
CLN6-213ENST00000636212 MED19A0JLT2 244 aaPredicted RBP19.77■□□□□ 0.76
CLN6-213ENST00000636212 KHNYNO15037 678 aaKnown RBP19.77■□□□□ 0.76
CLN6-213ENST00000636212 THAP12O43422 761 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 LETM1O95202 739 aaPredicted RBP19.77■□□□□ 0.76
CLN6-213ENST00000636212 GABRG2P18507 467 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 GNA15P30679 374 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 USP8P40818 1118 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 SLC11A2P49281 568 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 EIF4HQ15056 248 aaKnown RBP19.77■□□□□ 0.76
CLN6-213ENST00000636212 MEA1Q16626 185 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 EXOC3L4Q17RC7 722 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 ADGRF1Q5T601 910 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 NUGGCQ68CJ6 796 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 RNF43Q68DV7 783 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 MSANTD2Q6P1R3 559 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 TRIM65Q6PJ69 517 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 FAM217AQ8IXS0 508 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 FAM149B1Q96BN6 582 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 TMA16Q96EY4 203 aaKnown RBP19.77■□□□□ 0.76
CLN6-213ENST00000636212 ACOX2Q99424 681 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 DDX50Q9BQ39 737 aaKnown RBP19.77■□□□□ 0.76
CLN6-213ENST00000636212 ZSWIM1Q9BR11 485 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 CRACR2AQ9BSW2 395 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 SMOC1Q9H4F8 434 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 CALCOCO1Q9P1Z2 691 aa19.77■□□□□ 0.76
CLN6-213ENST00000636212 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 A0A1W2PQF6 199 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 CAPN9O14815 690 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 MSI1O43347 362 aaKnown RBP19.76■□□□□ 0.75
CLN6-213ENST00000636212 TIMM44O43615 452 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 TSPAN3O60637 253 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 CALCAP01258 141 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 NCAM1P13591 858 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 TBX4P57082 545 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 MAP7D1Q3KQU3 841 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 STPG1Q5TH74 334 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 TMEFF1Q8IYR6 380 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 PIGKQ92643 395 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 SERPINB11Q96P15 392 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 IRX2Q9BZI1 471 aaPredicted RBP19.76■□□□□ 0.75
CLN6-213ENST00000636212 CIPCQ9C0C6 399 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 NUP62CLQ9H1M0 184 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 THAP9Q9H5L6 903 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 APEX2Q9UBZ4 518 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 HCN2Q9UL51 889 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 STON1Q9Y6Q2 735 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 DMXL1Q9Y485 3027 aa19.76■□□□□ 0.75
CLN6-213ENST00000636212 TYW5A2RUC4 315 aaKnown RBP19.75■□□□□ 0.75
CLN6-213ENST00000636212 GTPBP10A4D1E9 387 aaKnown RBP19.75■□□□□ 0.75
CLN6-213ENST00000636212 SYNCRIPO60506 623 aaKnown RBP19.75■□□□□ 0.75
CLN6-213ENST00000636212 KCNA4P22459 653 aa19.75■□□□□ 0.75
CLN6-213ENST00000636212 GPD2P43304 727 aa19.75■□□□□ 0.75
CLN6-213ENST00000636212 RPL6Q02878 288 aaKnown RBP19.75■□□□□ 0.75
CLN6-213ENST00000636212 RING1Q06587 406 aa19.75■□□□□ 0.75
CLN6-213ENST00000636212 ARHGAP44Q17R89 818 aa19.75■□□□□ 0.75
CLN6-213ENST00000636212 GEN1Q17RS7 908 aa19.75■□□□□ 0.75
CLN6-213ENST00000636212 LYSMD4Q5XG99 296 aa19.75■□□□□ 0.75
CLN6-213ENST00000636212 CCDC117Q8IWD4 279 aaPredicted RBP19.75■□□□□ 0.75
CLN6-213ENST00000636212 ZNF557Q8N988 423 aaPredicted RBP19.75■□□□□ 0.75
CLN6-213ENST00000636212 CLEC4CQ8WTT0 213 aa19.75■□□□□ 0.75
CLN6-213ENST00000636212 STK32AQ8WU08 396 aa19.75■□□□□ 0.75
CLN6-213ENST00000636212 ZNF606Q8WXB4 792 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms