RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 SLC4A5Q9BY07 1137 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 ARHGEF4Q9NR80 690 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.06□□□□□ -0.64
PSPC1-207ENST00000635251 LTBP3Q9NS15 1303 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 WDR27A2RRH5 827 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 A6NHS1 94 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 CAPN14A8MX76 684 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 BIRC5O15392 142 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 TSPAN1O60635 241 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 MAGEC1O60732 1142 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 TBX10O75333 385 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 STAU1O95793 577 aaKnown RBP11.06□□□□□ -0.64
PSPC1-207ENST00000635251 LCP1P13796 627 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 ADORA2BP29275 332 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 PEX19P40855 299 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 CES4AQ5XG92 561 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 NT5DC4Q86YG4 428 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 SCUBE1Q8IWY4 988 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 RBM15BQ8NDT2 890 aaKnown RBP11.06□□□□□ -0.64
PSPC1-207ENST00000635251 CLEC4CQ8WTT0 213 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 SLC35F5Q8WV83 523 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 NRG4Q8WWG1 115 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 KHSRPQ92945 711 aaKnown RBP eCLIP11.06□□□□□ -0.64
PSPC1-207ENST00000635251 CLMNQ96JQ2 1002 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 MAGEB5Q9BZ81 275 aa11.06□□□□□ -0.64
PSPC1-207ENST00000635251 FAM124BQ9H5Z6 455 aaPredicted RBP11.06□□□□□ -0.64
PSPC1-207ENST00000635251 STX18Q9P2W9 335 aaKnown RBP11.06□□□□□ -0.64
PSPC1-207ENST00000635251 HBS1LQ9Y450 684 aaKnown RBP11.06□□□□□ -0.64
PSPC1-207ENST00000635251 A0A0G2JLL6 359 aaPredicted RBP11.05□□□□□ -0.64
PSPC1-207ENST00000635251 MAP3K7O43318 606 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 TOP3BO95985 862 aaKnown RBP11.05□□□□□ -0.64
PSPC1-207ENST00000635251 AMPD1P23109 780 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 CNTFP26441 200 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 MAGEA3P43357 314 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 NR2C2P49116 596 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 DPYSL2Q16555 572 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 NBPF20Q3BBV1 942 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 HSF5Q4G112 596 aaPredicted RBP11.05□□□□□ -0.64
PSPC1-207ENST00000635251 PKDCCQ504Y2 493 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 FASTKD1Q53R41 847 aaKnown RBP11.05□□□□□ -0.64
PSPC1-207ENST00000635251 TMEM154Q6P9G4 183 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 ARCQ7LC44 396 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 PRRT2Q7Z6L0 340 aaPredicted RBP11.05□□□□□ -0.64
PSPC1-207ENST00000635251 IFNLR1Q8IU57 520 aaPredicted RBP11.05□□□□□ -0.64
PSPC1-207ENST00000635251 ZDHHC17Q8IUH5 632 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 WDR75Q8IWA0 830 aaKnown RBP11.05□□□□□ -0.64
PSPC1-207ENST00000635251 TFB1MQ8WVM0 346 aaKnown RBP11.05□□□□□ -0.64
PSPC1-207ENST00000635251 CDKL2Q92772 493 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 QKIQ96PU8 341 aaKnown RBP eCLIP11.05□□□□□ -0.64
PSPC1-207ENST00000635251 LPIN3Q9BQK8 851 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 THTPAQ9BU02 230 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 APOL6Q9BWW8 343 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 YIPF3Q9GZM5 350 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 C20orf27Q9GZN8 174 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 THAP1Q9NVV9 213 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 ZNF212Q9UDV6 495 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 NR2E3Q9Y5X4 410 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 HMX2A2RU54 273 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 DPPA5A6NC42 116 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 PRR5-ARHGAP8B1AHC4 643 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 ZNF487B1APH4 448 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 PPEF2O14830 753 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 TOMM70O94826 608 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 UPP2O95045 317 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 NPTXRO95502 500 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 LINGO3P0C6S8 592 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 ZNF286BP0CG31 522 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 ARL4AP40617 200 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 PTPN9P43378 593 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 ERFP50548 548 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 RAP1GDS1P52306 607 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 SESN2P58004 480 aaPredicted RBP11.05□□□□□ -0.64
PSPC1-207ENST00000635251 CRADDP78560 199 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 ARHGAP8P85298 464 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 AP1B1Q10567 949 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 SEMA5AQ13591 1074 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 TBCCQ15814 346 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 DNAL1Q4LDG9 190 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 BSPRYQ5W0U4 402 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 C16orf46Q6P387 395 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 ADGRF2Q8IZF7 708 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 UNC5BQ8IZJ1 945 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 FBXO27Q8NI29 283 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 AFG1LQ8WV93 481 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 HTR3CQ8WXA8 447 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 ATP2A3Q93084 1043 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 CSPG4P5Q96PW8 444 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 KCTD15Q96SI1 283 aaPredicted RBP11.05□□□□□ -0.64
PSPC1-207ENST00000635251 EBF4Q9BQW3 602 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 RBPJLQ9UBG7 517 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 ANGPTL2Q9UKU9 493 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 GINS2Q9Y248 185 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 LRCH1Q9Y2L9 728 aa11.05□□□□□ -0.64
PSPC1-207ENST00000635251 DNAJC25-GNG10A0A024R161 153 aa11.04□□□□□ -0.64
PSPC1-207ENST00000635251 ASB14A6NK59 587 aa11.04□□□□□ -0.64
PSPC1-207ENST00000635251 SNNO75324 88 aaPredicted RBP11.04□□□□□ -0.64
PSPC1-207ENST00000635251 LYPLA1O75608 230 aaPredicted RBP11.04□□□□□ -0.64
PSPC1-207ENST00000635251 GABBR2O75899 941 aa11.04□□□□□ -0.64
PSPC1-207ENST00000635251 SERPINA6P08185 405 aa11.04□□□□□ -0.64
PSPC1-207ENST00000635251 FDFT1P37268 417 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms