RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 HEMGNQ9BXL5 484 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 PI4K2BG5E9Z4 385 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 H0YHG0 523 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 TMEM189-UBE2V1I3L0A0 370 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 RFPL2O75678 378 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 OAZ2O95190 189 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 DSG1Q02413 1049 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 ITKQ08881 620 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 DNAJC21Q5F1R6 531 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 C1orf228Q6PIY5 440 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 CLEC20AQ6ZU45 233 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 HAUS1Q96CS2 278 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 RBM41Q96IZ5 413 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 DDX50Q9BQ39 737 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 FAM124BQ9H5Z6 455 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 ANK1P16157 1881 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 VGLL3A8MV65 326 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 HIDE1A8MVS5 230 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 H7C0C1 242 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 B4GALT3O60512 393 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 FAM163BP0C2L3 166 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 CDC25CP30307 473 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 ATP5OP48047 213 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 SLC11A2P49281 568 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 CORO7P57737 925 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 GUCY1A3Q02108 690 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 ARHGAP17Q68EM7 881 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 TTC30AQ86WT1 665 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 RHOT1Q8IXI2 618 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 SPPL3Q8TCT6 385 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 CASP10Q92851 521 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 ACSF2Q96CM8 615 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 KLHL5Q96PQ7 755 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 HERPUD2Q9BSE4 406 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 CNGB3Q9NQW8 809 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 ABCC13Q9NSE7 274 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 INSL5Q9Y5Q6 135 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 CITO14578 2027 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 TRAV19A0A0A6YYK7 116 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 WDR27A2RRH5 827 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 SLC38A8A6NNN8 435 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 HMGB1P1B2RPK0 211 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 FGFR3P22607 806 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 ATP1A2P50993 1020 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 SPDYCQ5MJ68 293 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 PDE12Q6L8Q7 609 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 MON1AQ86VX9 555 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 ZDHHC17Q8IUH5 632 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 RYBPQ8N488 228 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 SPATA18Q8TC71 538 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 EPAS1Q99814 870 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 COLQQ9Y215 455 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 A0A1W2PQH9 124 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 ATF2P15336 505 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 NR1D1P20393 614 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 WEE1P30291 646 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 LSP1P33241 339 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 TBX4P57082 545 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 B4GALNT4Q76KP1 1039 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 TAOK1Q7L7X3 1001 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 JAMLQ86YT9 394 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 MRPL43Q8N983 215 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 CNPY3Q9BT09 278 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 HEY1Q9Y5J3 304 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 BACE2Q9Y5Z0 518 aa12.92□□□□□ -0.34
SYNGAP1-207ENST00000628646 A0A1W2PRU2 124 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 MDM4O15151 490 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 TGM5O43548 720 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 F9P00740 461 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 KCNA5P22460 613 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 IFNAR2P48551 515 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 TPI1P60174 286 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 MRPS5P82675 430 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 COG7P83436 770 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 ANO4Q32M45 955 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 TAB3Q8N5C8 712 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 ATP6V0D2Q8N8Y2 350 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 RPRD1AQ96P16 312 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 NSRP1Q9H0G5 558 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 NSUN3Q9H649 340 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 INPPL1O15357 1258 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 ADAM12O43184 909 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 STK10O94804 968 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 CFHP08603 1231 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 SLC2A3P11169 496 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 EPCAMP16422 314 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 ADCY8P40145 1251 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 DHX9Q08211 1270 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 KCNT1Q5JUK3 1230 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 GRASPQ7Z6J2 395 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 LRRTM3Q86VH5 581 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 C12orf50Q8NA57 414 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 CFAP57Q96MR6 1250 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 LHX5Q9H2C1 402 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 OLA1Q9NTK5 396 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 GPATCH2LQ9NWQ4 482 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 RSPH14Q9UHP6 348 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 TTC3P53804 2025 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 PHF2O75151 1096 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms