RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 CREB5Q02930 508 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 SF3A2Q15428 464 aaKnown RBP11.32□□□□□ -0.6
SSBP4-215ENST00000625926 TPD52L1Q16890 204 aaPredicted RBP11.32□□□□□ -0.6
SSBP4-215ENST00000625926 MPPE1Q53F39 396 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 EGFLAMQ63HQ2 1017 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 PMS2CLQ68D20 193 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 TRIM65Q6PJ69 517 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 GBP6Q6ZN66 633 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 FAM217AQ8IXS0 508 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 DDI1Q8WTU0 396 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 RLN3Q8WXF3 142 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 P2RY11Q96G91 374 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 SPACA7Q96KW9 195 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 CNTNAP3BQ96NU0 1288 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 ACOX2Q99424 681 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 GABRG3Q99928 467 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 CRACR2AQ9BSW2 395 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 SLC2A11Q9BYW1 496 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 CNTNAP3Q9BZ76 1288 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 KIF26AQ9ULI4 1882 aaPredicted RBP11.32□□□□□ -0.6
SSBP4-215ENST00000625926 A0A1W2PQF6 199 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 BCLAF3A2AJT9 711 aaKnown RBP11.31□□□□□ -0.6
SSBP4-215ENST00000625926 DCDC2BA2VCK2 349 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 GFRA2O00451 464 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 NPC1O15118 1278 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 SART1O43290 800 aaKnown RBP11.31□□□□□ -0.6
SSBP4-215ENST00000625926 GDF9O60383 454 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 LETM1O95202 739 aaPredicted RBP11.31□□□□□ -0.6
SSBP4-215ENST00000625926 LATS1O95835 1130 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 LTFP02788 710 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 SLC9A1P19634 815 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 BCKDHBP21953 392 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 ACADSBP45954 432 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 MTIF2P46199 727 aaKnown RBP11.31□□□□□ -0.6
SSBP4-215ENST00000625926 ZNF445P59923 1031 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 E2F5Q15329 346 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 MEA1Q16626 185 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 EXOC3L4Q17RC7 722 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 MAP7D1Q3KQU3 841 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 ADGRF1Q5T601 910 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 MSANTD2Q6P1R3 559 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 LPCAT2Q7L5N7 544 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 IRF2BP1Q8IU81 584 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 UNC45BQ8IWX7 931 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 SCUBE3Q8IX30 993 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 STK32AQ8WU08 396 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 UCMAQ8WVF2 138 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 ZNF606Q8WXB4 792 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 TMA16Q96EY4 203 aaKnown RBP11.31□□□□□ -0.6
SSBP4-215ENST00000625926 MIS12Q9H081 205 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 ST7Q9NRC1 585 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 APEX2Q9UBZ4 518 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 DACH1Q9UI36 760 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 STOML2Q9UJZ1 356 aa11.31□□□□□ -0.6
SSBP4-215ENST00000625926 GTPBP10A4D1E9 387 aaKnown RBP11.3□□□□□ -0.6
SSBP4-215ENST00000625926 MSI1O43347 362 aaKnown RBP11.3□□□□□ -0.6
SSBP4-215ENST00000625926 TIMM44O43615 452 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 TSPAN3O60637 253 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 ZNF217O75362 1048 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 NCAM1P13591 858 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 GABRG2P18507 467 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 ERCC5P28715 1186 aaPredicted RBP11.3□□□□□ -0.6
SSBP4-215ENST00000625926 USP8P40818 1118 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 RPL34P49207 117 aaKnown RBP11.3□□□□□ -0.6
SSBP4-215ENST00000625926 DHPSP49366 369 aaPredicted RBP11.3□□□□□ -0.6
SSBP4-215ENST00000625926 LIMK1P53667 647 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 ARHGAP44Q17R89 818 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 GEN1Q17RS7 908 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 SPDYCQ5MJ68 293 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 NUGGCQ68CJ6 796 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 SMYD5Q6GMV2 418 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 DENND1BQ6P3S1 775 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 GJB7Q6PEY0 223 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 ANKS1BQ7Z6G8 1248 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 FAM114A1Q8IWE2 563 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 IPO4Q8TEX9 1081 aaKnown RBP11.3□□□□□ -0.6
SSBP4-215ENST00000625926 CLEC4CQ8WTT0 213 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 PIWIL1Q96J94 861 aaKnown RBP11.3□□□□□ -0.6
SSBP4-215ENST00000625926 NUP62CLQ9H1M0 184 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 SMOC1Q9H4F8 434 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 THAP9Q9H5L6 903 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 CACNA2D2Q9NY47 1150 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 THAP10Q9P2Z0 257 aaPredicted RBP11.3□□□□□ -0.6
SSBP4-215ENST00000625926 CLEC4EQ9ULY5 219 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 STON1Q9Y6Q2 735 aa11.3□□□□□ -0.6
SSBP4-215ENST00000625926 SETXQ7Z333 2677 aaKnown RBP11.3□□□□□ -0.6
SSBP4-215ENST00000625926 EP300Q09472 2414 aaPredicted RBP11.29□□□□□ -0.6
SSBP4-215ENST00000625926 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 WASH3PC4AMC7 463 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 THAP12O43422 761 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 PON1P27169 355 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 GNA15P30679 374 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 SLC11A2P49281 568 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 TBX4P57082 545 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 RING1Q06587 406 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 STARD3Q14849 445 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 EIF4HQ15056 248 aaKnown RBP11.29□□□□□ -0.6
SSBP4-215ENST00000625926 MAN2A1Q16706 1144 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 DPCR1Q3MIW9 517 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 CT47A1Q5JQC4 288 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms