RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 MMP13P45452 471 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 CXCR3P49682 368 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 NDUFV1P49821 464 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 ZNF33AQ06730 810 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 PDIA2Q13087 525 aaKnown RBP16.93■□□□□ 0.3
LDB3-208ENST00000623007 NME3Q13232 169 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 AUHQ13825 339 aaKnown RBP16.93■□□□□ 0.3
LDB3-208ENST00000623007 DNAJC21Q5F1R6 531 aaKnown RBP16.93■□□□□ 0.3
LDB3-208ENST00000623007 ANKRD33Q7Z3H0 272 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 ZBED8Q8IZ13 594 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 OR10T2Q8NGX3 314 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 LINC01599Q8WXQ3 324 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 OLFM3Q96PB7 478 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 WDCPQ9H6R7 721 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 DDIT4Q9NX09 232 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 SLC12A6Q9UHW9 1150 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 XPO7Q9UIA9 1087 aaKnown RBP16.93■□□□□ 0.3
LDB3-208ENST00000623007 ADAM28Q9UKQ2 775 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 NAALADL1Q9UQQ1 740 aa16.93■□□□□ 0.3
LDB3-208ENST00000623007 NRP1O14786 923 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 DDHD2O94830 711 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 TFE3P19532 575 aaPredicted RBP16.92■□□□□ 0.3
LDB3-208ENST00000623007 TPSB2P20231 275 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 GRIK1P39086 918 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 GLUD2P49448 558 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 KCNJ11Q14654 390 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 TPSAB1Q15661 275 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 CCDC38Q502W7 563 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 C1orf53Q5VUE5 145 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 SYPL2Q5VXT5 272 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 BSPRYQ5W0U4 402 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 NCBP2-AS2Q69YL0 99 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 NPNTQ6UXI9 565 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 RFX8Q6ZV50 586 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 SPATS2Q86XZ4 545 aaKnown RBP16.92■□□□□ 0.3
LDB3-208ENST00000623007 NPAS4Q8IUM7 802 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 OSBPL2Q9H1P3 480 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 ARHGEF4Q9NR80 690 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.92■□□□□ 0.3
LDB3-208ENST00000623007 PCDHB5Q9Y5E4 795 aa16.92■□□□□ 0.3
LDB3-208ENST00000623007 PTPRDP23468 1912 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 EXOC1LA0A1B0GW35 172 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 DCDC2CA8MYV0 355 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 OPHN1O60890 802 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 CXCL10P02778 98 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 FYNP06241 537 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 SLC2A3P11169 496 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 RBL1P28749 1068 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 LSP1P33241 339 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 PSEN1P49768 467 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 ATP1A2P50993 1020 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 ZSCAN26Q16670 478 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 PAN2Q504Q3 1202 aaKnown RBP16.91■□□□□ 0.3
LDB3-208ENST00000623007 RAB6CQ53S08 254 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 OTUD1Q5VV17 481 aaPredicted RBP16.91■□□□□ 0.3
LDB3-208ENST00000623007 TADA2BQ86TJ2 420 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 DBF4BQ8NFT6 615 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 HTR3CQ8WXA8 447 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 VAT1Q99536 393 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 RAB6CQ9H0N0 254 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 EPN3Q9H201 632 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 XAB2Q9HCS7 855 aaKnown RBP16.91■□□□□ 0.3
LDB3-208ENST00000623007 WDR6Q9NNW5 1121 aaKnown RBP16.91■□□□□ 0.3
LDB3-208ENST00000623007 PIGVQ9NUD9 493 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 I3L4J1 428 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 NBNO60934 754 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 DGKIO75912 1065 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 GOT1P17174 413 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 IBSPP21815 317 aaPredicted RBP16.91■□□□□ 0.3
LDB3-208ENST00000623007 RFC2P35250 354 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 TPI1P60174 286 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 SEMA3BQ13214 749 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 DPYSQ14117 519 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 BTBD8Q5XKL5 378 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 KCNT2Q6UVM3 1135 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 ARHGEF18Q6ZSZ5 1173 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 MON1AQ86VX9 555 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 ZNF280BQ86YH2 543 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 PALM2Q8IXS6 379 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 SPPL2BQ8TCT7 592 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 EPS8L3Q8TE67 593 aaKnown RBP16.91■□□□□ 0.3
LDB3-208ENST00000623007 HASPINQ8TF76 798 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 C9orf72Q96LT7 481 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 HAPLN3Q96S86 360 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 UNC93B1Q9H1C4 597 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 VPS37BQ9H9H4 285 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 EIF2B3Q9NR50 452 aaKnown RBP16.91■□□□□ 0.3
LDB3-208ENST00000623007 RAB6BQ9NRW1 208 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 ETNK2Q9NVF9 386 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 DTLQ9NZJ0 730 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 CALCOCO1Q9P1Z2 691 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 FNIP2Q9P278 1114 aa16.91■□□□□ 0.3
LDB3-208ENST00000623007 ZMYND8Q9ULU4 1186 aaPredicted RBP16.91■□□□□ 0.3
LDB3-208ENST00000623007 RTN3O95197 1032 aaPredicted RBP16.9■□□□□ 0.3
LDB3-208ENST00000623007 MLNP12872 115 aa16.9■□□□□ 0.3
LDB3-208ENST00000623007 IGFBP6P24592 240 aaPredicted RBP16.9■□□□□ 0.3
LDB3-208ENST00000623007 YWHAGP61981 247 aaKnown RBP eCLIP16.9■□□□□ 0.3
LDB3-208ENST00000623007 COG7P83436 770 aa16.9■□□□□ 0.3
LDB3-208ENST00000623007 MRPL58Q14197 206 aaKnown RBP16.9■□□□□ 0.3
LDB3-208ENST00000623007 PPP2R5DQ14738 602 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms