RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 A0A1W2PRQ8 180 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 H3BNH8 94 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 TMX2-CTNND1H3BSU7 103 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 GOLGA8MH3BSY2 632 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 CCRL2O00421 344 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 LILRB3O75022 631 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 ZC3H11AO75152 810 aaKnown RBP eCLIP8.16□□□□□ -1.1
VPS11-209ENST00000622309 BMP10O95393 424 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 MT-ND3P03897 115 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 SERPINA6P08185 405 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 INHBBP09529 407 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 KRT5P13647 590 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 SLC5A1P13866 664 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 YBX3P16989 372 aaKnown RBP eCLIP8.16□□□□□ -1.1
VPS11-209ENST00000622309 SOX5P35711 763 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 COASYQ13057 564 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 SMAD4Q13485 552 aaKnown RBP8.16□□□□□ -1.1
VPS11-209ENST00000622309 SIX1Q15475 284 aaPredicted RBP8.16□□□□□ -1.1
VPS11-209ENST00000622309 GRIK5Q16478 980 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 SMU1Q2TAY7 513 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 LSM12Q3MHD2 195 aaKnown RBP8.16□□□□□ -1.1
VPS11-209ENST00000622309 ERFEQ4G0M1 354 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 IGFN1Q86VF2 1251 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 ZNF276Q8N554 614 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 LSMEM1Q8N8F7 131 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 TOR1AIP2Q8NFQ8 470 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 NEDD1Q8NHV4 660 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 HCAR2Q8TDS4 363 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 ATL1Q8WXF7 558 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 FAM111AQ96PZ2 611 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 MROQ9BYG7 248 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 PNPLA3Q9NST1 481 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.16□□□□□ -1.1
VPS11-209ENST00000622309 XPO7Q9UIA9 1087 aaKnown RBP8.16□□□□□ -1.1
VPS11-209ENST00000622309 USTQ9Y2C2 406 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 BTAF1O14981 1849 aa8.16□□□□□ -1.1
VPS11-209ENST00000622309 MYH3P11055 1940 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 ERVV-1B6SEH8 477 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 TNPO2O14787 897 aaKnown RBP8.15□□□□□ -1.1
VPS11-209ENST00000622309 DDAH1O94760 285 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 C8BP07358 591 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 FDX1P10109 184 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 VEGFAP15692 232 aaPredicted RBP8.15□□□□□ -1.1
VPS11-209ENST00000622309 CYP7A1P22680 504 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 MAP4P27816 1152 aaKnown RBP8.15□□□□□ -1.1
VPS11-209ENST00000622309 NKX2-5P52952 324 aaPredicted RBP8.15□□□□□ -1.1
VPS11-209ENST00000622309 GNG2P59768 71 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 PHC1P78364 1004 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 TMPRSS15P98073 1019 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 IFITM2Q01629 132 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 CHRNDQ07001 517 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 SPCS2Q15005 226 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 SF3B3Q15393 1217 aaKnown RBP8.15□□□□□ -1.1
VPS11-209ENST00000622309 FGD3Q5JSP0 725 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 CEP78Q5JTW2 689 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 AGAP7PQ5VUJ5 663 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 BTBD8Q5XKL5 378 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 EEPD1Q7L9B9 569 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 CRLF3Q8IUI8 442 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 SIX6OS1Q8N1H7 587 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 CLIP4Q8N3C7 705 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 FBXW8Q8N3Y1 598 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 HM13Q8TCT9 377 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 SGCDQ92629 289 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 NLRP4Q96MN2 994 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 TMEM79Q9BSE2 394 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 TDRD1Q9BXT4 1180 aaKnown RBP8.15□□□□□ -1.1
VPS11-209ENST00000622309 SMARCAD1Q9H4L7 1026 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 RPF2Q9H7B2 306 aaKnown RBP8.15□□□□□ -1.1
VPS11-209ENST00000622309 PI4KBQ9UBF8 816 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 RIMKLBQ9ULI2 386 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 SLC8A2Q9UPR5 921 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 GOLGA8IPA6NC78 632 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 M0QX08 132 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 TSPAN1O60635 241 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 ATP5BP06576 529 aaKnown RBP8.15□□□□□ -1.1
VPS11-209ENST00000622309 KRT3P12035 628 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 ALAS2P22557 587 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 MLLT3P42568 568 aaPredicted RBP8.15□□□□□ -1.1
VPS11-209ENST00000622309 JAM2P57087 298 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 TROAPQ12815 778 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 COX10Q12887 443 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 ARHGAP44Q17R89 818 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 AARS2Q5JTZ9 985 aaKnown RBP8.15□□□□□ -1.1
VPS11-209ENST00000622309 ATG16L1Q676U5 607 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 ANKRD26P1Q6NSI1 321 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 ANKS1BQ7Z6G8 1248 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 CHSY1Q86X52 802 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 TMEM126BQ8IUX1 230 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 LSMEM2Q8N112 164 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 ZCCHC9Q8N567 271 aaKnown RBP8.15□□□□□ -1.1
VPS11-209ENST00000622309 MINDY2Q8NBR6 621 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 LINC00116Q8NCU8 138 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 GRIN3AQ8TCU5 1115 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 ADAMTS16Q8TE57 1224 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 FRS2Q8WU20 508 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 EGLN2Q96KS0 407 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 TCF12Q99081 682 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 MXD3Q9BW11 206 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 ACP6Q9NPH0 428 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms