RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 APPL2Q8NEU8 664 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 RFWD2Q8NHY2 731 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 PARK7Q99497 189 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 TRIM55Q9BYV6 548 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 TRIM6Q9C030 488 aaPredicted RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 SNX25Q9H3E2 840 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 EIF2B3Q9NR50 452 aaKnown RBP9.76□□□□□ -0.85
PDPN-212ENST00000621990 MOCS1Q9NZB8 636 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 PLLPQ9Y342 182 aa9.76□□□□□ -0.85
PDPN-212ENST00000621990 COL4A4P53420 1690 aaPredicted RBP9.75□□□□□ -0.85
PDPN-212ENST00000621990 A0A0A0MRY4 1105 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 HMX2A2RU54 273 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 WDR91A4D1P6 747 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 A8MUI8 341 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 COPEO14579 308 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 DAB1O75553 588 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 MAP3K6O95382 1288 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 PDGFRBP09619 1106 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 CSH1P0DML2 217 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 CSH2P0DML3 217 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 LCP1P13796 627 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 TKTP29401 623 aaKnown RBP9.75□□□□□ -0.85
PDPN-212ENST00000621990 RASSF2P50749 326 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 FAM91A1Q658Y4 838 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 BZW1Q7L1Q6 419 aaKnown RBP9.75□□□□□ -0.85
PDPN-212ENST00000621990 HTR3CQ8WXA8 447 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 KCTD13Q8WZ19 329 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 SKA1Q96BD8 255 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 OXNAD1Q96HP4 312 aaPredicted RBP9.75□□□□□ -0.85
PDPN-212ENST00000621990 TNIP3Q96KP6 325 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 SPATA13Q96N96 652 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 MAGEB5Q9BZ81 275 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 YY1AP1Q9H869 796 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 ZFP69BQ9UJL9 534 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 HAO1Q9UJM8 370 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 RPL26L1Q9UNX3 145 aaKnown RBP9.75□□□□□ -0.85
PDPN-212ENST00000621990 GINS2Q9Y248 185 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 MTO1Q9Y2Z2 717 aaKnown RBP9.75□□□□□ -0.85
PDPN-212ENST00000621990 PCDHA11Q9Y5I1 949 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 GLTPD2A6NH11 291 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 HGSO14964 777 aaPredicted RBP9.75□□□□□ -0.85
PDPN-212ENST00000621990 KRT38O76015 456 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 VAV1P15498 845 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 CNTFP26441 200 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 LRPAP1P30533 357 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 HOXC8P31273 242 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 FDFT1P37268 417 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 CCNG1P51959 295 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 MFSD10Q14728 455 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 FAM182AQ5T1J6 154 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 HEATR6Q6AI08 1181 aaKnown RBP9.75□□□□□ -0.85
PDPN-212ENST00000621990 TLDC1Q6P9B6 456 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 MTDHQ86UE4 582 aaKnown RBP9.75□□□□□ -0.85
PDPN-212ENST00000621990 ADGRF2Q8IZF7 708 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 B3GALNT2Q8NCR0 500 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 RAB3IL1Q8TBN0 382 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 TFB1MQ8WVM0 346 aaKnown RBP9.75□□□□□ -0.85
PDPN-212ENST00000621990 C7orf26Q96N11 449 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 DUSP16Q9BY84 665 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 ARHGEF4Q9NR80 690 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 SIRPGQ9P1W8 387 aa9.75□□□□□ -0.85
PDPN-212ENST00000621990 PIN4Q9Y237 131 aaKnown RBP9.75□□□□□ -0.85
PDPN-212ENST00000621990 GOT1P17174 413 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 CRHR1P34998 444 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 GLUD2P49448 558 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 SERPINB9P50453 376 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 LILRA4P59901 499 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 FKBP1BP68106 108 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 CDK18Q07002 472 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 E2F5Q15329 346 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 NBPF20Q3BBV1 942 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 MORN1Q5T089 497 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 PIGZQ86VD9 579 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 CTAGE3PQ8IX95 158 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 MPP5Q8N3R9 675 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 SMG8Q8ND04 991 aaKnown RBP9.74□□□□□ -0.85
PDPN-212ENST00000621990 LRRN4Q8WUT4 740 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 TBC1D31Q96DN5 1066 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 PTCD3Q96EY7 689 aaKnown RBP9.74□□□□□ -0.85
PDPN-212ENST00000621990 SLC2A13Q96QE2 648 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 NPY6RQ99463 290 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 TBC1D10AQ9BXI6 508 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 RNF39Q9H2S5 420 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 STK38LQ9Y2H1 464 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 ZNF638Q14966 1978 aaKnown RBP9.74□□□□□ -0.85
PDPN-212ENST00000621990 IQCA1LA6NCM1 817 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 GABRDO14764 452 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 DYNC1LI2O43237 492 aaPredicted RBP9.74□□□□□ -0.85
PDPN-212ENST00000621990 UGT1A9O60656 530 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 CBX6O95503 412 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 BGNP21810 368 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 AMPD1P23109 780 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 CRYBB1P53674 252 aaPredicted RBP9.74□□□□□ -0.85
PDPN-212ENST00000621990 OVGP1Q12889 678 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 DBN1Q16643 649 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 ANKRD20A2Q5SQ80 823 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 STXBP5Q5T5C0 1151 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 ANKRD20A1Q5TYW2 823 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 ANKRD20A3Q5VUR7 823 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 LRRC8BQ6P9F7 803 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms