RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 MAP7D3Q8IWC1 876 aa10.92□□□□□ -0.66
VPS11-208ENST00000621676 KATNAL2Q8IYT4 538 aa10.92□□□□□ -0.66
VPS11-208ENST00000621676 CRYBG2Q8N1P7 616 aa10.92□□□□□ -0.66
VPS11-208ENST00000621676 PDCD6IPQ8WUM4 868 aaKnown RBP10.92□□□□□ -0.66
VPS11-208ENST00000621676 TMEM169Q96HH4 297 aa10.92□□□□□ -0.66
VPS11-208ENST00000621676 VCPIP1Q96JH7 1222 aa10.92□□□□□ -0.66
VPS11-208ENST00000621676 SLC4A5Q9BY07 1137 aa10.92□□□□□ -0.66
VPS11-208ENST00000621676 TRIM43BA6NCK2 446 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 PSTPIP1O43586 416 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 JCHAINP01591 159 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 ERCC2P18074 760 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 IL4RP24394 825 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 MTERF4Q7Z6M4 381 aaKnown RBP10.91□□□□□ -0.66
VPS11-208ENST00000621676 PALM2Q8IXS6 379 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 FAM76AQ8TAV0 307 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 DYDC1Q8WWB3 177 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 PIK3R5Q8WYR1 880 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 TRIM43Q96BQ3 446 aaPredicted RBP10.91□□□□□ -0.66
VPS11-208ENST00000621676 SMARCD1Q96GM5 515 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 POPDC2Q9HBU9 364 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 ZDHHC4Q9NPG8 344 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 KLHL8Q9P2G9 620 aaPredicted RBP10.91□□□□□ -0.66
VPS11-208ENST00000621676 ANK1P16157 1881 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 TARSL2A2RTX5 802 aaKnown RBP10.91□□□□□ -0.66
VPS11-208ENST00000621676 METTL18O95568 372 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 NEFHP12036 1026 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 MATKP42679 507 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 IKBKEQ14164 716 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 RAP1GAP2Q684P5 730 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 FAM109BQ6ICB4 259 aaPredicted RBP10.91□□□□□ -0.66
VPS11-208ENST00000621676 TRAF7Q6Q0C0 670 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 C14orf80Q86SX3 495 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 PQLC3Q8N755 202 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 DNAAF3Q8N9W5 541 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 SPATA22Q8NHS9 363 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 BADQ92934 168 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 CSPG4P5Q96PW8 444 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 RNF157Q96PX1 679 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 HNRNPABQ99729 332 aaKnown RBP10.91□□□□□ -0.66
VPS11-208ENST00000621676 MAF1Q9H063 256 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 ACBD3Q9H3P7 528 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 GDAP2Q9NXN4 497 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 A0A0G2JMZ2 1700 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 LCHNA4D1U4 455 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 PMPCBO75439 489 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 TMEM63AO94886 807 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 HSPA1AP0DMV8 641 aaKnown RBP10.91□□□□□ -0.66
VPS11-208ENST00000621676 HSPA1BP0DMV9 641 aaKnown RBP10.91□□□□□ -0.66
VPS11-208ENST00000621676 MCM3P25205 808 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 DAOAP59103 153 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 ZNF844Q08AG5 666 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 COL9A2Q14055 689 aaPredicted RBP10.91□□□□□ -0.66
VPS11-208ENST00000621676 EFHC2Q5JST6 749 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 DCLRE1AQ6PJP8 1040 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 UNC93AQ86WB7 457 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 COLGALT2Q8IYK4 626 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 CYP4X1Q8N118 509 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 VPS52Q8N1B4 723 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 MPP5Q8N3R9 675 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 DMAP1Q9NPF5 467 aaPredicted RBP10.91□□□□□ -0.66
VPS11-208ENST00000621676 CHST12Q9NRB3 414 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 RGS18Q9NS28 235 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 WDR35Q9P2L0 1181 aa10.91□□□□□ -0.66
VPS11-208ENST00000621676 LAMA1P25391 3075 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 XPO1O14980 1071 aaKnown RBP10.9□□□□□ -0.66
VPS11-208ENST00000621676 RGS16O15492 202 aaPredicted RBP10.9□□□□□ -0.66
VPS11-208ENST00000621676 TOP3BO95985 862 aaKnown RBP10.9□□□□□ -0.66
VPS11-208ENST00000621676 MT-CYBP00156 380 aaPredicted RBP10.9□□□□□ -0.66
VPS11-208ENST00000621676 BMPR2Q13873 1038 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 EMBQ6PCB8 327 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 TPGS1Q6ZTW0 290 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 C3orf62Q6ZUJ4 267 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 OTOP3Q7RTS5 596 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 HOOK3Q86VS8 718 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 IGDCC3Q8IVU1 814 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 SLC25A41Q8N5S1 370 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 TOP6BLQ8N6T0 577 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 OR6K2Q8NGY2 324 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 TTC8Q8TAM2 541 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 DQX1Q8TE96 717 aaKnown RBP10.9□□□□□ -0.66
VPS11-208ENST00000621676 TMEM174Q8WUU8 243 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 SNF8Q96H20 258 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 CALR3Q96L12 384 aaKnown RBP10.9□□□□□ -0.66
VPS11-208ENST00000621676 COLEC11Q9BWP8 271 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 UGT1A9O60656 530 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 CABYRO75952 493 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 CNTN5O94779 1100 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 LRIG2O94898 1065 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 GJB5O95377 273 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 L1CAMP32004 1257 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 KLF1Q13351 362 aaPredicted RBP10.9□□□□□ -0.66
VPS11-208ENST00000621676 DSC3Q14574 896 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 PTPRRQ15256 657 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 PKDCCQ504Y2 493 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 HEATR6Q6AI08 1181 aaKnown RBP10.9□□□□□ -0.66
VPS11-208ENST00000621676 ZNF598Q86UK7 904 aaKnown RBP10.9□□□□□ -0.66
VPS11-208ENST00000621676 CACUL1Q86Y37 369 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 PYROXD1Q8WU10 500 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 SMIM14Q96QK8 99 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 UGT1A7Q9HAW7 530 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms