RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 NRXN2Q9P2S2 1712 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 NCF1BA6NI72 391 aaPredicted RBP8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 NCF1CA8MVU1 366 aaPredicted RBP8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 NCF1P14598 390 aaPredicted RBP8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 ITGB6P18564 788 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 PPP3CCP48454 512 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 SCNN1BP51168 640 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 KLF1Q13351 362 aaPredicted RBP8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 TMEM132BQ14DG7 1078 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 ITPRIPL1Q6GPH6 555 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 LAYNQ6UX15 382 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 TRIM72Q6ZMU5 477 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 ZCCHC9Q8N567 271 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 ZNF606Q8WXB4 792 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 MYOCQ99972 504 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 C20orf96Q9NUD7 363 aaPredicted RBP8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 SLC25A13Q9UJS0 675 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 ITM2BQ9Y287 266 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 PKP3Q9Y446 797 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 ARID1BQ8NFD5 2236 aaPredicted RBP8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 LOC100653049A0A140TA62 436 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 DNALI1O14645 258 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 KRT34O76011 436 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 CYP1A1P04798 512 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 RPA3P35244 121 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 TXNRD3NBQ6F5E7 133 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 MPZL3Q6UWV2 235 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 TAS1R3Q7RTX0 852 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 VSIG10LQ86VR7 867 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 RCOR2Q8IZ40 523 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 C7orf43Q8WVR3 580 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 CAMKK2Q96RR4 588 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 NTPCRQ9BSD7 190 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 TINF2Q9BSI4 451 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 MYLK2Q9H1R3 596 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 TXLNGQ9NUQ3 528 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 PCMTD2Q9NV79 361 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 LIASO43766 372 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 LZTS3O60299 673 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 TBC1D12O60347 775 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 VNN1O95497 513 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 C4BPAP04003 597 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 KRT4P19013 534 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 UBA1P22314 1058 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 BDNFP23560 247 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 SYTL3Q4VX76 610 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 FBXO47Q5MNV8 452 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 RGMBQ6NW40 437 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 NUP93Q8N1F7 819 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 IL1RL2Q9HB29 575 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 NPHS2Q9NP85 383 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 SLC39A10Q9ULF5 831 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 A0A1W2PPM1 405 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 BUD23O43709 281 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 OAS1P00973 400 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 SSTR1P30872 391 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 MLH1P40692 756 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 GLRBP48167 497 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 KPNA2P52292 529 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 OVGP1Q12889 678 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 ZNF177Q13360 481 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 ZNF268Q14587 947 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 MFSD10Q14728 455 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 LVRNQ6Q4G3 990 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 C3orf62Q6ZUJ4 267 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 CDKL3Q8IVW4 592 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 SLC44A2Q8IWA5 706 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 TMCO5AQ8N6Q1 288 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 MAGEC3Q8TD91 643 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 GRAMD1AQ96CP6 724 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 SMAD5Q99717 465 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 TRIM54Q9BYV2 358 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 XPO7Q9UIA9 1087 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 SUFUQ9UMX1 484 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 UTRNP46939 3433 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 GOLGA8TH3BQL2 631 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 TRDMT1O14717 391 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 RECQL4O94761 1208 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 ODC1P11926 461 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 TPH1P17752 444 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 TCN1P20061 433 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 GPD1P21695 349 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 TKTL1P51854 596 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 NDST1P52848 882 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 KDSRQ06136 332 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 MGAT5Q09328 741 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 PWP1Q13610 501 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 TBCCQ15814 346 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 HSDL1Q3SXM5 330 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 SCARA3Q6AZY7 606 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 SPOCD1Q6ZMY3 1216 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 TRABD2AQ86V40 505 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 ASAP3Q8TDY4 903 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 SLC26A7Q8TE54 656 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 FAM161BQ96MY7 647 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 CHST12Q9NRB3 414 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 ARHGAP28Q9P2N2 729 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 C15orf41Q9Y2V0 281 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 USH1CQ9Y6N9 552 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms