RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 S100A14Q9HCY8 104 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 CISHQ9NSE2 258 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 PLLPQ9Y342 182 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 PDE4DIPQ5VU43 2346 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 MAGEB3O15480 346 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 STAT5BP51692 787 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 C1QBPQ07021 282 aaKnown RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 ART3Q13508 389 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 FASTKD1Q53R41 847 aaKnown RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 B3GNT9Q6UX72 402 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 TAS1R3Q7RTX0 852 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 ZNF677Q86XU0 584 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 HOMEZQ8IX15 550 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 ARFGAP1Q8N6T3 406 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 CXorf38Q8TB03 319 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 NKD2Q969F2 451 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 LRGUKQ96M69 825 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 MMADHCQ9H3L0 296 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 LIN28AQ9H9Z2 209 aaKnown RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 XAB2Q9HCS7 855 aaKnown RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 ZNF358Q9NW07 568 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 KCNK4Q9NYG8 393 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 CAPN14A8MX76 684 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 MAGEC1O60732 1142 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 CSH1P0DML2 217 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 CSH2P0DML3 217 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 PMLP29590 882 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 MIPP30301 263 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 SERPINB5P36952 375 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 RAP1GDS1P52306 607 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 GSTA3Q16772 222 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 C15orf59Q2T9L4 293 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 TTC39BQ5VTQ0 682 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 DENND1BQ6P3S1 775 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 PHF13Q86YI8 300 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 TNS4Q8IZW8 715 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 MPP5Q8N3R9 675 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 PHTF2Q8N3S3 785 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 UBA3Q8TBC4 463 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 SEPT1Q8WYJ6 367 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 USP13Q92995 863 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 CEP41Q9BYV8 373 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 HAPLN2Q9GZV7 340 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 MAP3K20Q9NYL2 800 aaKnown RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 PLA2G4CQ9UP65 541 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 C10orf71Q711Q0 1435 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 EXTL3O43909 919 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 HSPA4LO95757 839 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CLPTM1O96005 669 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 MYL3P08590 195 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 EEF1B2P24534 225 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 RBL1P28749 1068 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CRABP2P29373 138 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 GALK1P51570 392 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 COPAP53621 1224 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 PKNOX1P55347 436 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 ROR1Q01973 937 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 VGLL4Q14135 290 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 PIGHQ14442 188 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CNGA3Q16281 694 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 PTPN20Q4JDL3 420 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 DNAL1Q4LDG9 190 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CMPK2Q5EBM0 449 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 PPM1JQ5JR12 505 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 MFSD14CQ5VZR4 134 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 PDZD4Q76G19 769 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 ZBTB46Q86UZ6 589 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 C4orf19Q8IY42 314 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 ARHGAP18Q8N392 663 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 WDTC1Q8N5D0 677 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 OR6B3Q8NGW1 331 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 RNPEPQ9H4A4 650 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CDK5RAP2Q96SN8 1893 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 TAF1LQ8IZX4 1826 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 DNAH12Q6ZR08 3092 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CNTNAP2Q9UHC6 1331 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CCDC78A2IDD5 438 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 ITGBL1O95965 494 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CALB1P05937 261 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 UQCRBP14927 111 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CYP2B6P20813 491 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 PGGT1BP53609 377 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 SESN2P58004 480 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 MRPS22P82650 360 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 SREBF2Q12772 1141 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 MSLNQ13421 630 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 XKR3Q5GH77 459 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 FBXL19Q6PCT2 694 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 KCTD17Q8N5Z5 321 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 SAMD3Q8N6K7 520 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 SYTL5Q8TDW5 730 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 FAM172AQ8WUF8 416 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 MAGEB5Q9BZ81 275 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 CCDC68Q9H2F9 335 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 LRRC4Q9HBW1 653 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 TDRKHQ9Y2W6 561 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 HBS1LQ9Y450 684 aaKnown RBP7.17□□□□□ -1.26
NEDD9-216ENST00000620854 ZNF711Q9Y462 761 aa7.17□□□□□ -1.26
NEDD9-216ENST00000620854 C15orf38-AP3S2A0A0A6YYH1 394 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms