RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 ETNK2Q9NVF9 386 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 WDR35Q9P2L0 1181 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PPP1R1BQ9UD71 204 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 A0A0G2JLL6 359 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 A0A1B0GUA9 196 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 CFAP69A5D8W1 941 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 CAPN14A8MX76 684 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 NOP56O00567 594 aaKnown RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 CHADO15335 359 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 GSC2O15499 205 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 MED7O43513 233 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 TSPAN1O60635 241 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 DNAJC6O75061 913 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SMNDC1O75940 238 aaKnown RBP eCLIP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 KRT36O76013 467 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 RNF8O76064 485 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ARHGEF15O94989 841 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 IL18RAPO95256 599 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 MT-ND3P03897 115 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 AMHP03971 560 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 F7P08709 466 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 MCF2P10911 925 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 MYL2P10916 166 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 VDRP11473 427 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 VAV1P15498 845 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 TSHRP16473 764 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 IGFBP6P24592 240 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 YY1P25490 414 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ARRB2P32121 409 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 CPA2P48052 419 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PTDSS1P48651 473 aaKnown RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SLC8A3P57103 927 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PITX1P78337 314 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 CRADDP78560 199 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 CDK16Q00536 496 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 OCRLQ01968 901 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 BST1Q10588 318 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 KPNB1Q14974 876 aaKnown RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 NAA25Q14CX7 972 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SMAD1Q15797 465 aaKnown RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 FAM187BQ17R55 369 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 MARCH8Q5T0T0 291 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 OTUD1Q5VV17 481 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 OR6B2Q6IFH4 312 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ANO7Q6IWH7 933 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 LCLAT1Q6UWP7 414 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PRRT2Q7Z6L0 340 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 KBTBD2Q8IY47 623 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ADGRF2Q8IZF7 708 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PPM1NQ8N819 430 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 FAM172AQ8WUF8 416 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 NANOS1Q8WY41 292 aaKnown RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SIGLEC10Q96LC7 697 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ACAP3Q96P50 834 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 NUDCD1Q96RS6 583 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 NFKBIZQ9BYH8 718 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 C2orf40Q9H1Z8 148 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ELP3Q9H9T3 547 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 NGRNQ9NPE2 291 aaKnown RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SAR1AQ9NR31 198 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ASNSD1Q9NWL6 643 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PIH1D1Q9NWS0 290 aaKnown RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 DONSONQ9NYP3 566 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 TAS2R1Q9NYW7 299 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SIRPGQ9P1W8 387 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 HESX1Q9UBX0 185 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 TUBGCP4Q9UGJ1 667 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 EMCNQ9ULC0 261 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 BARX2Q9UMQ3 279 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SUFUQ9UMX1 484 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 LRRC42Q9Y546 428 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 HEY1Q9Y5J3 304 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 USP3Q9Y6I4 520 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 CEP350Q5VT06 3117 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 CITO14578 2027 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.47□□□□□ -1.69
SEC22B-202ENST00000618538 BCLAF3A2AJT9 711 aaKnown RBP4.47□□□□□ -1.69
SEC22B-202ENST00000618538 FAM159BA6NKW6 160 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 H7C0C1 242 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 FCHO1O14526 889 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 ADCY6O43306 1168 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 GAS2O43903 313 aaKnown RBP4.47□□□□□ -1.69
SEC22B-202ENST00000618538 SNNO75324 88 aaPredicted RBP4.47□□□□□ -1.69
SEC22B-202ENST00000618538 HAUS5O94927 633 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 TGDSO95455 350 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 IL1BP01584 269 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 LGALS2P05162 132 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 APRTP07741 180 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 LINGO3P0C6S8 592 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 TXNP10599 105 aaKnown RBP4.47□□□□□ -1.69
SEC22B-202ENST00000618538 RARBP10826 455 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 CD1EP15812 388 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 AMPD1P23109 780 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 L1CAMP32004 1257 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 ATP5OP48047 213 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 ERFP50548 548 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 TUBB3Q13509 450 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 OLIG2Q13516 323 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 BLMHQ13867 455 aa4.47□□□□□ -1.69
SEC22B-202ENST00000618538 CRYMQ14894 314 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms