RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 PENKP01210 267 aaPredicted RBP23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 HOXB2P14652 356 aa23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 BCKDHBP21953 392 aa23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 USP8P40818 1118 aa23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 HARS2P49590 506 aaKnown RBP23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 MFAP3P55082 362 aa23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 TRIP4Q15650 581 aaPredicted RBP23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 HSP90AA4PQ58FG1 418 aa23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 PLA2G2CQ5R387 149 aa23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 GBP6Q6ZN66 633 aa23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 CHPFQ8IZ52 775 aa23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 C12orf50Q8NA57 414 aaPredicted RBP23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 KCNV2Q8TDN2 545 aa23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 RLN3Q8WXF3 142 aa23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 HSFY1Q96LI6 401 aa23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 ST7Q9NRC1 585 aa23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 STARD13Q9Y3M8 1113 aa23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 HBS1LQ9Y450 684 aaKnown RBP23.05■■□□□ 1.28
SYNGR3-206ENST00000618464 THAP12O43422 761 aa23.04■■□□□ 1.28
SYNGR3-206ENST00000618464 TSPAN3O60637 253 aa23.04■■□□□ 1.28
SYNGR3-206ENST00000618464 RHOBTB1O94844 696 aa23.04■■□□□ 1.28
SYNGR3-206ENST00000618464 LTFP02788 710 aa23.04■■□□□ 1.28
SYNGR3-206ENST00000618464 CYBBP04839 570 aa23.04■■□□□ 1.28
SYNGR3-206ENST00000618464 NTSR1P30989 418 aa23.04■■□□□ 1.28
SYNGR3-206ENST00000618464 EXOC3L4Q17RC7 722 aa23.04■■□□□ 1.28
SYNGR3-206ENST00000618464 ENOSF1Q7L5Y1 443 aa23.04■■□□□ 1.28
SYNGR3-206ENST00000618464 IRGQQ8WZA9 623 aa23.04■■□□□ 1.28
SYNGR3-206ENST00000618464 GOLGA1Q92805 767 aa23.04■■□□□ 1.28
SYNGR3-206ENST00000618464 THAP9Q9H5L6 903 aa23.04■■□□□ 1.28
SYNGR3-206ENST00000618464 GNA15P30679 374 aa23.03■■□□□ 1.28
SYNGR3-206ENST00000618464 MPLP40238 635 aa23.03■■□□□ 1.28
SYNGR3-206ENST00000618464 GPD2P43304 727 aa23.03■■□□□ 1.28
SYNGR3-206ENST00000618464 CPXM2Q8N436 756 aa23.03■■□□□ 1.28
SYNGR3-206ENST00000618464 DDI1Q8WTU0 396 aa23.03■■□□□ 1.28
SYNGR3-206ENST00000618464 LMBRD1Q9NUN5 540 aa23.03■■□□□ 1.28
SYNGR3-206ENST00000618464 CACNA2D2Q9NY47 1150 aa23.03■■□□□ 1.28
SYNGR3-206ENST00000618464 APEX2Q9UBZ4 518 aa23.03■■□□□ 1.28
SYNGR3-206ENST00000618464 FBXO10Q9UK96 956 aa23.03■■□□□ 1.28
SYNGR3-206ENST00000618464 PCDHGA5Q9Y5G8 931 aa23.03■■□□□ 1.28
SYNGR3-206ENST00000618464 BECN2A8MW95 431 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 TM4SF5O14894 197 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 MED7O43513 233 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 FBXO21O94952 628 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 KCNA4P22459 653 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 PON1P27169 355 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 LIMK1P53667 647 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 CREB5Q02930 508 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 GEN1Q17RS7 908 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 IL31Q6EBC2 164 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 SDE2Q6IQ49 451 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 MSANTD2Q6P1R3 559 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 FAM114A1Q8IWE2 563 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 SCUBE3Q8IX30 993 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 FRMD1Q8N878 549 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 OLIG1Q8TAK6 271 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 ZNF606Q8WXB4 792 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 DACH1Q9UI36 760 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 CLEC4EQ9ULY5 219 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 RAD54BQ9Y620 910 aa23.02■■□□□ 1.28
SYNGR3-206ENST00000618464 A0A1W2PQF6 199 aa23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 PRKCSHP14314 528 aaPredicted RBP23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 GABRG2P18507 467 aa23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 MAN2A1Q16706 1144 aa23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 PMS2CLQ68D20 193 aa23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 TCEAL6Q6IPX3 200 aa23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 KIAA1211LQ6NV74 962 aa23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 CLEC17AQ6ZS10 378 aa23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 C11orf74Q86VG3 221 aa23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 FAM217AQ8IXS0 508 aa23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 TCEAL3Q969E4 200 aa23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 FAM149B1Q96BN6 582 aa23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 SPACA7Q96KW9 195 aa23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 AJAP1Q9UKB5 411 aaPredicted RBP23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 SLC27A6Q9Y2P4 619 aa23.01■■□□□ 1.27
SYNGR3-206ENST00000618464 ABCA7Q8IZY2 2146 aa23■■□□□ 1.27
SYNGR3-206ENST00000618464 GTPBP10A4D1E9 387 aaKnown RBP23■■□□□ 1.27
SYNGR3-206ENST00000618464 WASH3PC4AMC7 463 aa23■■□□□ 1.27
SYNGR3-206ENST00000618464 NCAM1P13591 858 aa23■■□□□ 1.27
SYNGR3-206ENST00000618464 P2RY2P41231 377 aa23■■□□□ 1.27
SYNGR3-206ENST00000618464 MPPE1Q53F39 396 aa23■■□□□ 1.27
SYNGR3-206ENST00000618464 STPG1Q5TH74 334 aa23■■□□□ 1.27
SYNGR3-206ENST00000618464 FAM81BQ96LP2 452 aa23■■□□□ 1.27
SYNGR3-206ENST00000618464 SIX2Q9NPC8 291 aa23■■□□□ 1.27
SYNGR3-206ENST00000618464 VPS45Q9NRW7 570 aa23■■□□□ 1.27
SYNGR3-206ENST00000618464 CYTH4Q9UIA0 394 aa23■■□□□ 1.27
SYNGR3-206ENST00000618464 MAP3K13O43283 966 aa22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 FYNP06241 537 aa22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 ERCC5P28715 1186 aaPredicted RBP22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 ACADSBP45954 432 aa22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 DHPSP49366 369 aaPredicted RBP22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 TBX4P57082 545 aa22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 ANKS1BQ7Z6G8 1248 aa22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 IPO4Q8TEX9 1081 aaKnown RBP22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 DDX1Q92499 740 aaKnown RBP22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 SHC3Q92529 594 aa22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 PIWIL1Q96J94 861 aaKnown RBP22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 CALCOCO1Q9P1Z2 691 aa22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 MBD1Q9UIS9 605 aaPredicted RBP22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 DNAJC12Q9UKB3 198 aa22.99■■□□□ 1.27
SYNGR3-206ENST00000618464 NAALADL1Q9UQQ1 740 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms