RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 NAT9Q9BTE0 207 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 TRIM54Q9BYV2 358 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 UNKQ9C0B0 810 aaKnown RBP7.5□□□□□ -1.21
CSDE1-218ENST00000610726 MANSC1Q9H8J5 431 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 OLA1Q9NTK5 396 aaKnown RBP7.5□□□□□ -1.21
CSDE1-218ENST00000610726 TRIM33Q9UPN9 1127 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 TTLL13PA6NNM8 815 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 NCAM2O15394 837 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 CILPO75339 1184 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 SYF2O95926 243 aaKnown RBP7.49□□□□□ -1.21
CSDE1-218ENST00000610726 ERBB2P04626 1255 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 ENO1P06733 434 aaKnown RBP7.49□□□□□ -1.21
CSDE1-218ENST00000610726 MYL2P10916 166 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 JAM2P57087 298 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 ZNF844Q08AG5 666 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 DPYSL3Q14195 570 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 TTC23LQ6PF05 361 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 KDM7AQ6ZMT4 941 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 STRA8Q7Z7C7 330 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 SLC26A11Q86WA9 606 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 TSPAN17Q96FV3 270 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 SERPINI1Q99574 410 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 CIPCQ9C0C6 399 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 ZNF446Q9NWS9 450 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 NINJ2Q9NZG7 142 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 PKP3Q9Y446 797 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 PKD1L3Q7Z443 1732 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 MYH14Q7Z406 1995 aaKnown RBP7.49□□□□□ -1.21
CSDE1-218ENST00000610726 OPHN1O60890 802 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 GOT1P17174 413 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 MGAT1P26572 445 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 RPL9P32969 192 aaKnown RBP7.49□□□□□ -1.21
CSDE1-218ENST00000610726 HOXD13P35453 343 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 TUFMP49411 452 aaKnown RBP7.49□□□□□ -1.21
CSDE1-218ENST00000610726 PLD1Q13393 1074 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 ANKRD20A8PQ5CZ79 823 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 LRRC38Q5VT99 294 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 C1orf146Q5VVC0 180 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 NUDT18Q6ZVK8 323 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 FAM35AQ86V20 835 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 LGI2Q8N0V4 545 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 ZNF516Q92618 1163 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 PPP1R2P1Q96PQ5 205 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 RNF157Q96PX1 679 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 MAF1Q9H063 256 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 TRMT13Q9NUP7 481 aaKnown RBP7.49□□□□□ -1.21
CSDE1-218ENST00000610726 ADA2Q9NZK5 511 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.49□□□□□ -1.213e-6■■■■□ 21.1
CSDE1-218ENST00000610726 TELO2Q9Y4R8 837 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 USH1CQ9Y6N9 552 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 KIAA0100Q14667 2235 aaKnown RBP7.49□□□□□ -1.21
CSDE1-218ENST00000610726 LOC100653049A0A140TA62 436 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 KIF3CO14782 793 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 CCDC22O60826 627 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 NOL3O60936 208 aaKnown RBP7.49□□□□□ -1.21
CSDE1-218ENST00000610726 ATP5HO75947 161 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 KRT34O76011 436 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 RHOBTB1O94844 696 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 ZWINTO95229 277 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 PYGBP11216 843 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 CALRP27797 417 aaKnown RBP7.49□□□□□ -1.21
CSDE1-218ENST00000610726 NOVP48745 357 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 RAD23BP54727 409 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 PTK6Q13882 451 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 POLD3Q15054 466 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-218ENST00000610726 GRAMD1BQ3KR37 738 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 UNC45BQ8IWX7 931 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 HS6ST3Q8IZP7 471 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 MSL3Q8N5Y2 521 aaKnown RBP7.49□□□□□ -1.21
CSDE1-218ENST00000610726 PBXIP1Q96AQ6 731 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 PRDM12Q9H4Q4 367 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 ATP13A1Q9HD20 1204 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 ERVK-5Q9HDB9 667 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 ABCC13Q9NSE7 274 aa7.49□□□□□ -1.21
CSDE1-218ENST00000610726 SF3B1O75533 1304 aaKnown RBP eCLIP7.49□□□□□ -1.211e-6■■■■■ 28.6
CSDE1-218ENST00000610726 TCRBV7S2A1N4TA0A589 114 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 WDR27A2RRH5 827 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 GNGT2O14610 69 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 LIASO43766 372 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 MAGEA9P43362 315 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 CLCNKBP51801 687 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 RHOAP61586 193 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 CRADDP78560 199 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 GRIK3Q13003 919 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 RBBP7Q16576 425 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 HSP90AA5PQ58FG0 334 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 PTAR1Q7Z6K3 402 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-218ENST00000610726 CCNJLQ8IV13 435 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 ATAD1Q8NBU5 361 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 MYCBPAPQ8TBZ2 947 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SH3KBP1Q96B97 665 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 ZBTB18Q99592 522 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 HIPK3Q9H422 1215 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 CACYBPQ9HB71 228 aaKnown RBP7.48□□□□□ -1.21
CSDE1-218ENST00000610726 CACNG4Q9UBN1 327 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 CRLS1Q9UJA2 301 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.48□□□□□ -1.21
CSDE1-218ENST00000610726 IRS2Q9Y4H2 1338 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 hCG_1818297A0A087WSY0 165 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 PRR23AA6NEV1 266 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms