RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 IL18RAPO95256 599 aa23.09■■□□□ 1.29
SHANK2-220ENST00000608988 MLNP12872 115 aa23.09■■□□□ 1.29
SHANK2-220ENST00000608988 VAV1P15498 845 aa23.09■■□□□ 1.29
SHANK2-220ENST00000608988 RBL1P28749 1068 aa23.09■■□□□ 1.29
SHANK2-220ENST00000608988 OGFRL1Q5TC84 451 aaPredicted RBP23.09■■□□□ 1.29
SHANK2-220ENST00000608988 DPY19L2Q6NUT2 758 aa23.09■■□□□ 1.29
SHANK2-220ENST00000608988 UGT2A3Q6UWM9 527 aa23.09■■□□□ 1.29
SHANK2-220ENST00000608988 FBXW8Q8N3Y1 598 aa23.09■■□□□ 1.29
SHANK2-220ENST00000608988 MARVELD2Q8N4S9 558 aa23.09■■□□□ 1.29
SHANK2-220ENST00000608988 DGCR14Q96DF8 476 aaKnown RBP23.09■■□□□ 1.29
SHANK2-220ENST00000608988 UGT1A7Q9HAW7 530 aa23.09■■□□□ 1.29
SHANK2-220ENST00000608988 UGT1A10Q9HAW8 530 aa23.09■■□□□ 1.29
SHANK2-220ENST00000608988 UGT1A8Q9HAW9 530 aa23.09■■□□□ 1.29
SHANK2-220ENST00000608988 CYP3A43Q9HB55 503 aa23.09■■□□□ 1.29
SHANK2-220ENST00000608988 IDH3AP50213 366 aa23.08■■□□□ 1.29
SHANK2-220ENST00000608988 R3HDM1Q15032 1099 aaKnown RBP23.08■■□□□ 1.29
SHANK2-220ENST00000608988 RNF111Q6ZNA4 994 aa23.08■■□□□ 1.29
SHANK2-220ENST00000608988 ZBTB33Q86T24 672 aa23.08■■□□□ 1.29
SHANK2-220ENST00000608988 CATSPER1Q8NEC5 780 aa23.08■■□□□ 1.29
SHANK2-220ENST00000608988 REPS2Q8NFH8 660 aa23.08■■□□□ 1.29
SHANK2-220ENST00000608988 ZBED3Q96IU2 234 aaPredicted RBP23.08■■□□□ 1.29
SHANK2-220ENST00000608988 ZNF670Q9BS34 389 aa23.08■■□□□ 1.29
SHANK2-220ENST00000608988 C2orf40Q9H1Z8 148 aa23.08■■□□□ 1.29
SHANK2-220ENST00000608988 SMYD3Q9H7B4 428 aa23.08■■□□□ 1.29
SHANK2-220ENST00000608988 ZNF219Q9P2Y4 722 aaPredicted RBP23.08■■□□□ 1.29
SHANK2-220ENST00000608988 POMPQ9Y244 141 aa23.08■■□□□ 1.29
SHANK2-220ENST00000608988 GAS2O43903 313 aaKnown RBP23.07■■□□□ 1.28
SHANK2-220ENST00000608988 VDRP11473 427 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 ZFXP17010 805 aaPredicted RBP23.07■■□□□ 1.28
SHANK2-220ENST00000608988 HARS2P49590 506 aaKnown RBP23.07■■□□□ 1.28
SHANK2-220ENST00000608988 AQP4P55087 323 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 ZNF534Q76KX8 674 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 KBTBD6Q86V97 674 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 SPATA24Q86W54 205 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 ZBTB8OSQ8IWT0 167 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 PQLC3Q8N755 202 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 CDKL2Q92772 493 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 ATG4CQ96DT6 458 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 EMCNQ9ULC0 261 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 ARHGAP26Q9UNA1 814 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 RIPK3Q9Y572 518 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 MAFO75444 373 aaPredicted RBP23.07■■□□□ 1.28
SHANK2-220ENST00000608988 DESP17661 470 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 GPD2P43304 727 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 TRIP10Q15642 601 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 IER5Q5VY09 327 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 METTL21CQ5VZV1 264 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 PDPK2PQ6A1A2 396 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 EXOC8Q8IYI6 725 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 RXFP2Q8WXD0 754 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 LZICQ8WZA0 190 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 TMEM176AQ96HP8 235 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 ZFRQ96KR1 1074 aaKnown RBP23.07■■□□□ 1.28
SHANK2-220ENST00000608988 RTKNQ9BST9 563 aa23.07■■□□□ 1.28
SHANK2-220ENST00000608988 PRPF19Q9UMS4 504 aaKnown RBP23.07■■□□□ 1.28
SHANK2-220ENST00000608988 ITGBL1O95965 494 aaPredicted RBP23.06■■□□□ 1.28
SHANK2-220ENST00000608988 PROCP04070 461 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 PDGFRAP16234 1089 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 ITGAXP20702 1163 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 IL4RP24394 825 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 PEX2P28328 305 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 MTTPP55157 894 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 SEMA5AQ13591 1074 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 TMEM259Q4ZIN3 620 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 RALGPS1Q5JS13 557 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 N4BP2L1Q5TBK1 243 aaPredicted RBP23.06■■□□□ 1.28
SHANK2-220ENST00000608988 LPCAT4Q643R3 524 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 TRMT10BQ6PF06 316 aaKnown RBP23.06■■□□□ 1.28
SHANK2-220ENST00000608988 ZCCHC23Q6ZST2 131 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 AGBL3Q8NEM8 1001 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 IFT122Q9HBG6 1241 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 PCDH18Q9HCL0 1135 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 NXF1Q9UBU9 619 aaKnown RBP23.06■■□□□ 1.28
SHANK2-220ENST00000608988 BCAP29Q9UHQ4 241 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 KIAA1257Q9ULG3 409 aa23.06■■□□□ 1.28
SHANK2-220ENST00000608988 A0A1B0GVG6 124 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 M0QYV0 167 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 MDM4O15151 490 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 ITM2AO43736 263 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 CILPO75339 1184 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 PRKCBP05771 671 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 RAG1P15918 1043 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 PROZP22891 400 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 ATICP31939 592 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 RPL5P46777 297 aaKnown RBP23.05■■□□□ 1.28
SHANK2-220ENST00000608988 NR2C2P49116 596 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 EPHB1P54762 984 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 NIPAL4Q0D2K0 466 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 FAM160B1Q5W0V3 765 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 SNRNP48Q6IEG0 339 aaKnown RBP23.05■■□□□ 1.28
SHANK2-220ENST00000608988 MPZL3Q6UWV2 235 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 DENND5BQ6ZUT9 1274 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 TTC39CQ8N584 583 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 RAB26Q9ULW5 256 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 PSMD13Q9UNM6 376 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 DTNAQ9Y4J8 743 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 P4HA1P13674 534 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 SERPINB6P35237 376 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 FDFT1P37268 417 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 GRIA2P42262 883 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms