RNA–Protein interactions for RNA: ENST00000607942.5

CCDC116-203, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC116, Length 1,913 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-203ENST00000607942 NMUR1Q9HB89 426 aa17.06■□□□□ 0.32
CCDC116-203ENST00000607942 USP29Q9HBJ7 922 aa17.06■□□□□ 0.32
CCDC116-203ENST00000607942 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
CCDC116-203ENST00000607942 ARHGEF4Q9NR80 690 aa17.06■□□□□ 0.32
CCDC116-203ENST00000607942 GOLGA6AQ9NYA3 693 aa17.06■□□□□ 0.32
CCDC116-203ENST00000607942 ADAM21Q9UKJ8 722 aa17.06■□□□□ 0.32
CCDC116-203ENST00000607942 A0A1W2PQH9 124 aa17.05■□□□□ 0.32
CCDC116-203ENST00000607942 EEF2KO00418 725 aaKnown RBP17.05■□□□□ 0.32
CCDC116-203ENST00000607942 ACSL3O95573 720 aa17.05■□□□□ 0.32
CCDC116-203ENST00000607942 HSPA8P11142 646 aaKnown RBP17.05■□□□□ 0.32
CCDC116-203ENST00000607942 ITGB8P26012 769 aa17.05■□□□□ 0.32
CCDC116-203ENST00000607942 GABPB1Q06547 395 aaPredicted RBP17.05■□□□□ 0.32
CCDC116-203ENST00000607942 SKIDA1Q1XH10 827 aa17.05■□□□□ 0.32
CCDC116-203ENST00000607942 ANKRD22Q5VYY1 191 aa17.05■□□□□ 0.32
CCDC116-203ENST00000607942 ZCCHC9Q8N567 271 aaKnown RBP17.05■□□□□ 0.32
CCDC116-203ENST00000607942 RNF34Q969K3 372 aa17.05■□□□□ 0.32
CCDC116-203ENST00000607942 SLC9A7Q96T83 725 aa17.05■□□□□ 0.32
CCDC116-203ENST00000607942 TTPALQ9BTX7 342 aa17.05■□□□□ 0.32
CCDC116-203ENST00000607942 CWH43Q9H720 699 aa17.05■□□□□ 0.32
CCDC116-203ENST00000607942 PRDM10Q9NQV6 1147 aa17.05■□□□□ 0.32
CCDC116-203ENST00000607942 NUDT5Q9UKK9 219 aa17.05■□□□□ 0.32
CCDC116-203ENST00000607942 MICAL3Q7RTP6 2002 aa17.05■□□□□ 0.32
CCDC116-203ENST00000607942 PATJQ8NI35 1801 aa17.05■□□□□ 0.32
CCDC116-203ENST00000607942 TRIM43BA6NCK2 446 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 GOLGA6L10A6NI86 522 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 GOLGA8MH3BSY2 632 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 TRIM66O15016 1216 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 DGKIO75912 1065 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 F9P00740 461 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 MYZAPP0CAP1 466 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 STIP1P31948 543 aaKnown RBP17.04■□□□□ 0.32
CCDC116-203ENST00000607942 CXCR3P49682 368 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 USP46P62068 366 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 GAD2Q05329 585 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 ELAVL2Q12926 359 aaKnown RBP17.04■□□□□ 0.32
CCDC116-203ENST00000607942 MORF4L2Q15014 288 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 KYNUQ16719 465 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 KRT71Q3SY84 523 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 VSTM1Q6UX27 236 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 RNF19BQ6ZMZ0 732 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 TRMT10CQ7L0Y3 403 aaKnown RBP17.04■□□□□ 0.32
CCDC116-203ENST00000607942 CPT1BQ92523 772 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 PRCCQ92733 491 aaPredicted RBP17.04■□□□□ 0.32
CCDC116-203ENST00000607942 NTAN1Q96AB6 310 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 TRIM43Q96BQ3 446 aaPredicted RBP17.04■□□□□ 0.32
CCDC116-203ENST00000607942 C8orf48Q96LL4 319 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 TKTL2Q9H0I9 626 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 WDCPQ9H6R7 721 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 BCCIPQ9P287 314 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCDC116-203ENST00000607942 RCOR3Q9P2K3 495 aaPredicted RBP17.04■□□□□ 0.32
CCDC116-203ENST00000607942 TBC1D4O60343 1298 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 VNN2O95498 520 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 NUDT17P0C025 328 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 MAGEA11P43364 429 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 ALDH7A1P49419 539 aaKnown RBP17.04■□□□□ 0.32
CCDC116-203ENST00000607942 HP1BP3Q5SSJ5 553 aaPredicted RBP17.04■□□□□ 0.32
CCDC116-203ENST00000607942 KCNT2Q6UVM3 1135 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 RFX8Q6ZV50 586 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 NUP93Q8N1F7 819 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 DNAJC5GQ8N7S2 189 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 RBM15Q96T37 977 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCDC116-203ENST00000607942 TSPYL1Q9H0U9 437 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 CRISPLD1Q9H336 500 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 SAYSD1Q9NPB0 183 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 ABCC13Q9NSE7 274 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 NINJ2Q9NZG7 142 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 DTLQ9NZJ0 730 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 SFMBT1Q9UHJ3 866 aa17.04■□□□□ 0.32
CCDC116-203ENST00000607942 TCRBV7S3A2A0A539 114 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 BCLAF3A2AJT9 711 aaKnown RBP17.03■□□□□ 0.32
CCDC116-203ENST00000607942 MTMR11A4FU01 709 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 SMIM23A6NLE4 172 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 H7C4K7 107 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 ADAM12O43184 909 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 MFSD11O43934 449 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 CSF2RAP15509 400 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 LBX1P52954 281 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 BASP1P80723 227 aaKnown RBP17.03■□□□□ 0.32
CCDC116-203ENST00000607942 DEFB103AP81534 67 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 SCAPQ12770 1279 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 DPYSQ14117 519 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 TERF2Q15554 542 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 ARL13BQ3SXY8 428 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 DNAJC21Q5F1R6 531 aaKnown RBP17.03■□□□□ 0.32
CCDC116-203ENST00000607942 SPOUT1Q5T280 376 aaKnown RBP17.03■□□□□ 0.32
CCDC116-203ENST00000607942 CDKL3Q8IVW4 592 aaPredicted RBP17.03■□□□□ 0.32
CCDC116-203ENST00000607942 PPIL6Q8IXY8 311 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 FAM76AQ8TAV0 307 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 ATP6V1G3Q96LB4 118 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 C9orf72Q96LT7 481 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 SEPT5Q99719 369 aaPredicted RBP17.03■□□□□ 0.32
CCDC116-203ENST00000607942 TRIM62Q9BVG3 475 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 VN1R3Q9BXE9 311 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 OSER1Q9NX31 292 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 FARP1Q9Y4F1 1045 aaPredicted RBP17.03■□□□□ 0.32
CCDC116-203ENST00000607942 NR2E3Q9Y5X4 410 aa17.03■□□□□ 0.32
CCDC116-203ENST00000607942 TLDC2A0PJX2 215 aa17.02■□□□□ 0.32
CCDC116-203ENST00000607942 MSI1O43347 362 aaKnown RBP17.02■□□□□ 0.32
CCDC116-203ENST00000607942 RPL17P18621 184 aaKnown RBP17.02■□□□□ 0.32
CCDC116-203ENST00000607942 RFC2P35250 354 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms