RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 PLGRKTQ9HBL7 147 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 EMCNQ9ULC0 261 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 CNTNAP4Q9C0A0 1308 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 WDR64B1ANS9 1081 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 H7C0C1 242 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 CFLARO15519 480 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 STAMBPO95630 424 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 C4BPAP04003 597 aaKnown RBP12.82□□□□□ -0.36
CDCA3-212ENST00000604599 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 ZNF23P17027 643 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 ATP5OP48047 213 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 NLRP11P59045 1033 aaKnown RBP12.82□□□□□ -0.36
CDCA3-212ENST00000604599 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 PPM1LQ5SGD2 360 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 C10orf107Q8IVU9 208 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 BHLHE22Q8NFJ8 381 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-212ENST00000604599 ABHD8Q96I13 439 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 LENG8Q96PV6 779 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-212ENST00000604599 SLX1AQ9BQ83 275 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 CAAP1Q9H8G2 361 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 ANLNQ9NQW6 1124 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 SIPA1L1O43166 1804 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 NOP56O00567 594 aaKnown RBP12.82□□□□□ -0.36
CDCA3-212ENST00000604599 RPS6KA4O75676 772 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 DGKIO75912 1065 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 PTPN1P18031 435 aaKnown RBP12.82□□□□□ -0.36
CDCA3-212ENST00000604599 KLF10Q13118 480 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 GPAT2Q6NUI2 795 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 SH3BP5LQ7L8J4 393 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 CROCCP3Q8IVE0 287 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 CATSPER1Q8NEC5 780 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 ADCY4Q8NFM4 1077 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 DEPDC1BQ8WUY9 529 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 PPP1R36Q96LQ0 422 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 CDRT15Q96T59 188 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-212ENST00000604599 RNPEPQ9H4A4 650 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 DNAJC28Q9NX36 388 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 PI4KBQ9UBF8 816 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 RGL2O15211 777 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 KRT7P08729 469 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 ZFXP17010 805 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-212ENST00000604599 ACAT1P24752 427 aaKnown RBP12.82□□□□□ -0.36
CDCA3-212ENST00000604599 EPHA3P29320 983 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 GABRB2P47870 512 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 PPP2R5DQ14738 602 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 PCLAFQ15004 111 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 ELMSAN1Q6PJG2 1045 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 CAND1Q86VP6 1230 aaKnown RBP12.82□□□□□ -0.36
CDCA3-212ENST00000604599 CPNE9Q8IYJ1 553 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 UNC5BQ8IZJ1 945 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 RSPH1Q8WYR4 309 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 HAUS8Q9BT25 410 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 OSBPL6Q9BZF3 934 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 EFR3BQ9Y2G0 817 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 RNF11Q9Y3C5 154 aa12.82□□□□□ -0.36
CDCA3-212ENST00000604599 KANSL1LA0AUZ9 987 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 SLC15A5A6NIM6 579 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 CHADO15335 359 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 FAM189A1O60320 539 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 ITGBL1O95965 494 aaPredicted RBP12.81□□□□□ -0.36
CDCA3-212ENST00000604599 CDH15P55291 814 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 MS4A2Q01362 244 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 PDAP1Q13442 181 aaKnown RBP12.81□□□□□ -0.36
CDCA3-212ENST00000604599 ADRM1Q16186 407 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 HADHQ16836 314 aaKnown RBP12.81□□□□□ -0.36
CDCA3-212ENST00000604599 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 MPP5Q8N3R9 675 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 UBR7Q8N806 425 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 TTLL6Q8N841 843 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 NIPA2Q8N8Q9 360 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 TMEM35BQ8NCS4 154 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 KBTBD7Q8WVZ9 684 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 PGBD4Q96DM1 585 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 RTKNQ9BST9 563 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 FRMD8P1Q9BZ68 369 aaPredicted RBP12.81□□□□□ -0.36
CDCA3-212ENST00000604599 SELENONQ9NZV5 590 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.81□□□□□ -0.36
CDCA3-212ENST00000604599 GOLGA8QA0A0J9YX86 632 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 RBM47A0AV96 593 aaKnown RBP12.81□□□□□ -0.36
CDCA3-212ENST00000604599 GOLGA8OA6NCC3 632 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 GOLGA8NF8WBI6 632 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 TMX2-CTNND1H3BSU7 103 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 ZNF195O14628 629 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 KCNN4O15554 427 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 XPOTO43592 962 aaKnown RBP12.81□□□□□ -0.36
CDCA3-212ENST00000604599 SERPINE1P05121 402 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 TCN1P20061 433 aaPredicted RBP12.81□□□□□ -0.36
CDCA3-212ENST00000604599 NDST2P52849 883 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 PFKPQ01813 784 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 SLC9B1Q4ZJI4 515 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 SNX32Q86XE0 403 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 THNSL1Q8IYQ7 743 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 SLC2A11Q9BYW1 496 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 SEMA6AQ9H2E6 1030 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 DHX33Q9H6R0 707 aaKnown RBP12.81□□□□□ -0.36
CDCA3-212ENST00000604599 EPS15L1Q9UBC2 864 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 EBF1Q9UH73 591 aa12.81□□□□□ -0.36
CDCA3-212ENST00000604599 TCEAL9Q9UHQ7 104 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms