RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	GAP43	P17677	238 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	LONP1	P36776	959 aa	Known RBP	11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	KCNH2	Q12809	1159 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	CAMK2G	Q13555	558 aa	Predicted RBP	11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	INAVA	Q3KP66	663 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	TBC1D25	Q3MII6	688 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	TAF1B	Q53T94	588 aa	Predicted RBP	11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	MCTP1	Q6DN14	999 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	GPRIN1	Q7Z2K8	1008 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	SYCP3	Q8IZU3	236 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	OR2T3	Q8NH03	318 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	SAP25	Q8TEE9	199 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	TTC9	Q92623	222 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	SMARCD1	Q96GM5	515 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	EPSTI1	Q96J88	318 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	SMYD3	Q9H7B4	428 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	CSNK1G1	Q9HCP0	422 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	KRT82	Q9NSB4	513 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	LSM7	Q9UK45	103 aa	Known RBP	11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	NUDT5	Q9UKK9	219 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	PCDHB13	Q9Y5F0	798 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	SPEN	Q96T58	3664 aa	Known RBP	11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	USP9X	Q93008	2570 aa	Predicted RBP	11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	ZNF233	A6NK53	670 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	C10orf142	B7Z368	130 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	CYP26A1	O43174	497 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	AP1G2	O75843	785 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	PRPF6	O94906	941 aa	Known RBP	11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	LDOC1	O95751	146 aa	Predicted RBP	11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	STAU1	O95793	577 aa	Known RBP	11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	WNT1	P04628	370 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	CDK4	P11802	303 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	HOXD13	P35453	343 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	ATP5C1	P36542	298 aa	Known RBP	11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	MYL6	P60660	151 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	TNNC1	P63316	161 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	RHD	Q02161	417 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	KCNC4	Q03721	635 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	LY6D	Q14210	128 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	SURF1	Q15526	300 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	PKDCC	Q504Y2	493 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	KLHDC10	Q6PID8	442 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	ANKS1B	Q7Z6G8	1248 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	RASSF8	Q8NHQ8	419 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	RFFL	Q8WZ73	363 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	ZNF516	Q92618	1163 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	ELF4	Q99607	663 aa	Predicted RBP	11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	SDCBP2	Q9H190	292 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	LHX5	Q9H2C1	402 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	TMEM245	Q9H330	911 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	EBF2	Q9HAK2	575 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	CPNE5	Q9HCH3	593 aa		11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	TLR8	Q9NR97	1041 aa	Known RBP	11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	TLN1	Q9Y490	2541 aa	Known RBP	11.62	□□□□□ -0.55
NUP62-222	ENST00000600935	UTP20	O75691	2785 aa	Known RBP	11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	HHLA1	C9JL84	531 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	KIAA0391	O15091	583 aa	Known RBP	11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	VILL	O15195	856 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	DFNA5	O60443	496 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	FSBP	O95073	299 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	WISP1	O95388	367 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	C6	P13671	934 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	CCDC130	P13994	396 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	GOLGA8F	Q08AF8	430 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	GOLGA8DP	Q0D2H9	430 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	EIF4H	Q15056	248 aa	Known RBP	11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	SERPINA13P	Q6UXR4	307 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	CACTIN-AS1	Q8N1I8	211 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	ZNF366	Q8N895	744 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	DCBLD1	Q8N8Z6	715 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	UCMA	Q8WVF2	138 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	ELMO3	Q96BJ8	720 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	HIC2	Q96JB3	615 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	SLC6A18	Q96N87	628 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	CGRRF1	Q99675	332 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	HNRNPAB	Q99729	332 aa	Known RBP	11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	MED10	Q9BTT4	135 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	BTBD1	Q9H0C5	482 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	FBXO44	Q9H4M3	255 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	HSPBP1	Q9NZL4	362 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	NXF1	Q9UBU9	619 aa	Known RBP	11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	SCML2	Q9UQR0	700 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	LRRK2	Q5S007	2527 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	DOPEY2	Q9Y3R5	2298 aa		11.61	□□□□□ -0.55
NUP62-222	ENST00000600935	ATP8B3	O60423	1300 aa		11.6	□□□□□ -0.55
NUP62-222	ENST00000600935		A0A1W2PQH9	124 aa		11.6	□□□□□ -0.55
NUP62-222	ENST00000600935	WNT9A	O14904	365 aa		11.6	□□□□□ -0.55
NUP62-222	ENST00000600935	DLAT	P10515	647 aa	Known RBP	11.6	□□□□□ -0.55
NUP62-222	ENST00000600935	RARG	P13631	454 aa		11.6	□□□□□ -0.55
NUP62-222	ENST00000600935	KRT10	P13645	584 aa		11.6	□□□□□ -0.55
NUP62-222	ENST00000600935	ACTN2	P35609	894 aa		11.6	□□□□□ -0.55
NUP62-222	ENST00000600935	PLA2G4A	P47712	749 aa		11.6	□□□□□ -0.55
NUP62-222	ENST00000600935	MAP3K7CL	P57077	242 aa		11.6	□□□□□ -0.55
NUP62-222	ENST00000600935	RPS14	P62263	151 aa	Known RBP	11.6	□□□□□ -0.55
NUP62-222	ENST00000600935	RACK1	P63244	317 aa	Known RBP	11.6	□□□□□ -0.55
NUP62-222	ENST00000600935	INSM1	Q01101	510 aa	Predicted RBP	11.6	□□□□□ -0.55
NUP62-222	ENST00000600935	ALCAM	Q13740	583 aa		11.6	□□□□□ -0.55
NUP62-222	ENST00000600935	ARHGAP40	Q5TG30	622 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms