RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 ENDOD1O94919 500 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 IGLV3-25P01717 112 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 RARGP13631 454 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 RFC1P35251 1148 aaPredicted RBP12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 PTPN9P43378 593 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 PGFP49763 221 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 ZNF143P52747 638 aaPredicted RBP12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 KIF5AQ12840 1032 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 IFRD2Q12894 506 aaPredicted RBP12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 EIF4EBP2Q13542 120 aaPredicted RBP12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 ACAP1Q15027 740 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 TAF5Q15542 800 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 SLC5A9Q2M3M2 681 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 ARHGAP15Q53QZ3 475 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 DGLUCYQ7Z3D6 616 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 KIAA1328Q86T90 577 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 DNAAF5Q86Y56 855 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 RNF10Q8N5U6 811 aaKnown RBP12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 UBE2Q2Q8WVN8 375 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 NDRG1Q92597 394 aaKnown RBP12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 CENPIQ92674 756 aaPredicted RBP12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 NXPE3Q969Y0 559 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 FAM149B1Q96BN6 582 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 ARHGEF26Q96DR7 871 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 ZNF830Q96NB3 372 aaPredicted RBP12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 NPY6RQ99463 290 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 NCAPGQ9BPX3 1015 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 DESI2Q9BSY9 194 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 NUP85Q9BW27 656 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 ATXN3LQ9H3M9 355 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 TASP1Q9H6P5 420 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 GDE1Q9NZC3 331 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 STAP1Q9ULZ2 295 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 MRPS23Q9Y3D9 190 aaKnown RBP12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 ZFP37Q9Y6Q3 630 aaPredicted RBP12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 EML5Q05BV3 1969 aa12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 HELZP42694 1942 aaKnown RBP12.15□□□□□ -0.46
CHMP2A-207ENST00000600804 A0A1W2PRU2 124 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 RCCD1A6NED2 376 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 GOLGA8SH3BPF8 625 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 CAPN9O14815 690 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 ZSCAN12O43309 604 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 MYL4P12829 197 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 NCAM1P13591 858 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 TCF3P15923 654 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 FSHRP23945 695 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 ATP5C1P36542 298 aaKnown RBP12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 FLT3P36888 993 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 ARHGAP25P42331 645 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 KPNA1P52294 538 aaPredicted RBP12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 RPL7AP62424 266 aaKnown RBP12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 SLC7A9P82251 487 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 MTA1Q13330 715 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 SLC25A52Q3SY17 297 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 DCUN1D2Q6PH85 259 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 STRADAQ7RTN6 431 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 DEFB106AQ8N104 65 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 NIPA2Q8N8Q9 360 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 ITFG1Q8TB96 612 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 SLC35G2Q8TBE7 412 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 ZNF564Q8TBZ8 553 aaPredicted RBP12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 TCEAL4Q96EI5 215 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 CNPY3Q9BT09 278 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 LACRTQ9GZZ8 138 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 TRPV4Q9HBA0 871 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 METTL5Q9NRN9 209 aaKnown RBP12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 DNMT3LQ9UJW3 386 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 PPP2R2CQ9Y2T4 447 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 HBS1LQ9Y450 684 aaKnown RBP12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 SPAG17Q6Q759 2223 aa12.14□□□□□ -0.47
CHMP2A-207ENST00000600804 ASPMQ8IZT6 3477 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 LAMA1P25391 3075 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 TRAV19A0A0A6YYK7 116 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 GOLGA6L9A6NEM1 432 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 MYO1FO00160 1098 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 NRG2O14511 850 aaPredicted RBP12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 CCP110O43303 1012 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 ATMINO43313 823 aaPredicted RBP12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 COCHO43405 550 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 KRT86O43790 486 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 F9P00740 461 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 PDGFRAP16234 1089 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 GPD1P21695 349 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 CD72P21854 359 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 SDC4P31431 198 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 MAN1A1P33908 653 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 RING1Q06587 406 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 PIGHQ14442 188 aaPredicted RBP12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 PUM1Q14671 1186 aaKnown RBP eCLIP12.13□□□□□ -0.475e-9■□□□□ 9
CHMP2A-207ENST00000600804 TEAD2Q15562 447 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 CCDC14Q49A88 953 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 DCAF6Q58WW2 860 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 SYPL2Q5VXT5 272 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 TRNP1Q6NT89 227 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 NPAS3Q8IXF0 933 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 JOSD2Q8TAC2 188 aa12.13□□□□□ -0.47
CHMP2A-207ENST00000600804 DQX1Q8TE96 717 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms