RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 IGLV3-27P01718 113 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 KLKB1P03952 638 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 PSMA2P25787 234 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 COG7P83436 770 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 TCEAL1Q15170 157 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 MTSS1LQ765P7 747 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 PLCD3Q8N3E9 789 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 FNIP1Q8TF40 1166 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 CENPIQ92674 756 aaPredicted RBP20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 ELSPBP1Q96BH3 223 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 PGAP3Q96FM1 320 aaPredicted RBP20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 PIGVQ9NUD9 493 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 OBP2AQ9NY56 170 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 TRIM10Q9UDY6 481 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 PRKAG3Q9UGI9 489 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 SALL4Q9UJQ4 1053 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 TLR6Q9Y2C9 796 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 CUL9Q8IWT3 2517 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 ECI2O75521 394 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 MTA2O94776 668 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 ENDOD1O94919 500 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 HDAC4P56524 1084 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 DEUP1Q05D60 604 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 NNTQ13423 1086 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 GRM2Q14416 872 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 ZC3H12AQ5D1E8 599 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 CPNE8Q86YQ8 564 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 ARFGAP1Q8N6T3 406 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 BPIFB1Q8TDL5 484 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 FAM172AQ8WUF8 416 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 CNPY3Q9BT09 278 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 ANLNQ9NQW6 1124 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 DUSP10Q9Y6W6 482 aa20.83■□□□□ 0.93
SHKBP1-222ENST00000600320 C19orf67A6NJJ6 358 aa20.82■□□□□ 0.92
SHKBP1-222ENST00000600320 ASGR2P07307 311 aa20.82■□□□□ 0.92
SHKBP1-222ENST00000600320 GBP1P32455 592 aa20.82■□□□□ 0.92
SHKBP1-222ENST00000600320 RDXP35241 583 aaKnown RBP20.82■□□□□ 0.92
SHKBP1-222ENST00000600320 DAB2IPQ5VWQ8 1189 aa20.82■□□□□ 0.92
SHKBP1-222ENST00000600320 STRADAQ7RTN6 431 aa20.82■□□□□ 0.92
SHKBP1-222ENST00000600320 DDX42Q86XP3 938 aaKnown RBP eCLIP20.82■□□□□ 0.92
SHKBP1-222ENST00000600320 RHOT2Q8IXI1 618 aa20.82■□□□□ 0.92
SHKBP1-222ENST00000600320 PLD4Q96BZ4 506 aa20.82■□□□□ 0.92
SHKBP1-222ENST00000600320 SH3BP1Q9Y3L3 701 aa20.82■□□□□ 0.92
SHKBP1-222ENST00000600320 VCANP13611 3396 aa20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 I6L893 689 aaPredicted RBP20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 CORO1AP31146 461 aaKnown RBP20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 ARHGAP25P42331 645 aa20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 CXCR3P49682 368 aa20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 KPNA1P52294 538 aaPredicted RBP20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 RING1Q06587 406 aa20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 Q6ZNB5 142 aa20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 FAM131BQ86XD5 332 aa20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 MFSD6LQ8IWD5 586 aa20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 BBS7Q8IWZ6 715 aa20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 E2F7Q96AV8 911 aa20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 ASIC4Q96FT7 647 aa20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 KCNK12Q9HB15 430 aa20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 IP6K2Q9UHH9 426 aa20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 XPO7Q9UIA9 1087 aaKnown RBP20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 PYCARDQ9ULZ3 195 aa20.81■□□□□ 0.92
SHKBP1-222ENST00000600320 KIF26AQ9ULI4 1882 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 A0A0A6YYK5 440 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 E2F8A0AVK6 867 aa20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 TMEM110-MUSTN1A8MSY1 372 aa20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 MYO1FO00160 1098 aa20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 F9P00740 461 aa20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 CCDC175P0C221 793 aa20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 NOP2P46087 812 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 HTR3DQ70Z44 454 aa20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 DENND1CQ8IV53 801 aa20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 ZFYVE19Q96K21 471 aa20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 NECAB3Q96P71 396 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 TMPRSS4Q9NRS4 437 aa20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 WNT6Q9Y6F9 365 aa20.8■□□□□ 0.92
SHKBP1-222ENST00000600320 BTNL10A8MVZ5 291 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 KCNU1A8MYU2 1149 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 BUB1O43683 1085 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 PROSCO94903 275 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 MOCS2O96007 188 aaPredicted RBP20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 HADHBP55084 474 aaKnown RBP20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 FCHO2Q0JRZ9 810 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 MESDQ14696 234 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 PPP2R5DQ14738 602 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 NUGGCQ68CJ6 796 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 SLC44A3Q8N4M1 653 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 NIPA2Q8N8Q9 360 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 DEPDC1BQ8WUY9 529 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 RNF34Q969K3 372 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 LINC00597Q9H2U6 94 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 ARHGEF38Q9NXL2 777 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 IGSF9Q9P2J2 1179 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 LSM7Q9UK45 103 aaKnown RBP20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 AGO1Q9UL18 857 aaKnown RBP20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 PPP2R2CQ9Y2T4 447 aa20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.79■□□□□ 0.92
SHKBP1-222ENST00000600320 LRCH4O75427 683 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 TCF4P15884 667 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 PSMC3P17980 439 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 CCR1P32246 355 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms