RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	SYPL2	Q5VXT5	272 aa		22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	DDX42	Q86XP3	938 aa	Known RBP eCLIP	22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	DEFB106A	Q8N104	65 aa		22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	RNF10	Q8N5U6	811 aa	Known RBP	22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	JOSD2	Q8TAC2	188 aa		22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	DQX1	Q8TE96	717 aa	Known RBP	22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	ATRIP	Q8WXE1	791 aa		22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	OSGEP	Q9NPF4	335 aa		22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	GKN1	Q9NS71	199 aa		22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	CFAP97	Q9P2B7	532 aa		22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	SFMBT1	Q9UHJ3	866 aa		22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	SORCS3	Q9UPU3	1222 aa		22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	DUSP10	Q9Y6W6	482 aa		22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	TICRR	Q7Z2Z1	1910 aa		22.88	■■□□□ 1.25
LTBP4-227	ENST00000600026	MACROD2	A1Z1Q3	448 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	MYO1F	O00160	1098 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	BUB1	O43683	1085 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	PDGFRA	P16234	1089 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	PSMC3	P17980	439 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	GPD1	P21695	349 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	NOS2	P35228	1153 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	MATK	P42679	507 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	RPL7A	P62424	266 aa	Known RBP	22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	FCHO2	Q0JRZ9	810 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	YAF2	Q8IY57	180 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	EMC1	Q8N766	993 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	RXFP2	Q8WXD0	754 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	SMOC2	Q9H3U7	446 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	EPHX3	Q9H6B9	360 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	RRN3	Q9NYV6	651 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	TRIM10	Q9UDY6	481 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	IP6K2	Q9UHH9	426 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	MUTYH	Q9UIF7	546 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	STAP1	Q9ULZ2	295 aa		22.87	■■□□□ 1.25
LTBP4-227	ENST00000600026	SLC12A8	A0AV02	714 aa		22.86	■■□□□ 1.25
LTBP4-227	ENST00000600026	C2CD4B	A6NLJ0	364 aa		22.86	■■□□□ 1.25
LTBP4-227	ENST00000600026	NARS	O43776	548 aa	Known RBP	22.86	■■□□□ 1.25
LTBP4-227	ENST00000600026	SDC4	P31431	198 aa		22.86	■■□□□ 1.25
LTBP4-227	ENST00000600026	FLT3	P36888	993 aa		22.86	■■□□□ 1.25
LTBP4-227	ENST00000600026	DCAF6	Q58WW2	860 aa		22.86	■■□□□ 1.25
LTBP4-227	ENST00000600026	TAC4	Q86UU9	113 aa		22.86	■■□□□ 1.25
LTBP4-227	ENST00000600026	FNIP1	Q8TF40	1166 aa		22.86	■■□□□ 1.25
LTBP4-227	ENST00000600026	WBP2	Q969T9	261 aa		22.86	■■□□□ 1.25
LTBP4-227	ENST00000600026	DDX23	Q9BUQ8	820 aa	Known RBP	22.86	■■□□□ 1.25
LTBP4-227	ENST00000600026	TRMT61B	Q9BVS5	477 aa	Known RBP	22.86	■■□□□ 1.25
LTBP4-227	ENST00000600026	SH3BP1	Q9Y3L3	701 aa		22.86	■■□□□ 1.25
LTBP4-227	ENST00000600026	MSI1	O43347	362 aa	Known RBP	22.85	■■□□□ 1.25
LTBP4-227	ENST00000600026	HMBS	P08397	361 aa		22.85	■■□□□ 1.25
LTBP4-227	ENST00000600026	PSMA2	P25787	234 aa		22.85	■■□□□ 1.25
LTBP4-227	ENST00000600026	GDI1	P31150	447 aa		22.85	■■□□□ 1.25
LTBP4-227	ENST00000600026	PITX1	P78337	314 aa	Predicted RBP	22.85	■■□□□ 1.25
LTBP4-227	ENST00000600026	ZSCAN30	Q86W11	494 aa		22.85	■■□□□ 1.25
LTBP4-227	ENST00000600026	ADAM32	Q8TC27	787 aa		22.85	■■□□□ 1.25
LTBP4-227	ENST00000600026	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	22.85	■■□□□ 1.25
LTBP4-227	ENST00000600026	SALL4	Q9UJQ4	1053 aa		22.85	■■□□□ 1.25
LTBP4-227	ENST00000600026	DUSP12	Q9UNI6	340 aa		22.85	■■□□□ 1.25
LTBP4-227	ENST00000600026	HBS1L	Q9Y450	684 aa	Known RBP	22.85	■■□□□ 1.25
LTBP4-227	ENST00000600026	PAXBP1	Q9Y5B6	917 aa		22.85	■■□□□ 1.25
LTBP4-227	ENST00000600026	COL4A3	Q01955	1670 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	USP27X	A6NNY8	438 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	SCAMP3	O14828	347 aa	Known RBP	22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	STC2	O76061	302 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	MOCS3	O95396	460 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	SRF	P11831	508 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	MSN	P26038	577 aa	Known RBP	22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	PTPN9	P43378	593 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	ZNF143	P52747	638 aa	Predicted RBP	22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	COG7	P83436	770 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	PIGH	Q14442	188 aa	Predicted RBP	22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	MESD	Q14696	234 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	TRNP1	Q6NT89	227 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	TPCN2	Q8NHX9	752 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	ASIC4	Q96FT7	647 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	ZFYVE19	Q96K21	471 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	SERPINB11	Q96P15	392 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	CNPY3	Q9BT09	278 aa		22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	THG1L	Q9NWX6	298 aa	Known RBP	22.84	■■□□□ 1.25
LTBP4-227	ENST00000600026	E2F8	A0AVK6	867 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	CHAD	O15335	359 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	IRAK2	O43187	625 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	TRUB2	O95900	331 aa	Known RBP	22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	IGLV3-25	P01717	112 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	SULT1E1	P49888	294 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	ACAP1	Q15027	740 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	SLC25A52	Q3SY17	297 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	OTUD1	Q5VV17	481 aa	Predicted RBP	22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	CC2D1A	Q6P1N0	951 aa	Predicted RBP	22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	PLD4	Q96BZ4	506 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	BTBD6	Q96KE9	485 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	ALS2CR12	Q96Q35	445 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	NCAPG	Q9BPX3	1015 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	LRFN3	Q9BTN0	628 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	TRIM7	Q9C029	511 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	BRD9	Q9H8M2	597 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	FAM204A	Q9H8W3	233 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	WNT6	Q9Y6F9	365 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	BDP1	A6H8Y1	2624 aa		22.83	■■□□□ 1.25
LTBP4-227	ENST00000600026	TMEM110-MUSTN1	A8MSY1	372 aa		22.82	■■□□□ 1.24
LTBP4-227	ENST00000600026	KIF5C	O60282	957 aa		22.82	■■□□□ 1.24
LTBP4-227	ENST00000600026	GREM1	O60565	184 aa		22.82	■■□□□ 1.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms