RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	C4BPA	P04003	597 aa	Known RBP	11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335	RARA	P10276	462 aa		11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335	MZF1	P28698	734 aa	Predicted RBP	11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ARL2	P36404	184 aa		11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ARL1	P40616	181 aa	Predicted RBP	11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335	MYL6	P60660	151 aa		11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335	PLCB3	Q01970	1234 aa		11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335	DHX34	Q14147	1143 aa	Known RBP	11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335	KDM7A	Q6ZMT4	941 aa		11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335	PDZD8	Q8NEN9	1154 aa		11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335	MRRF	Q96E11	262 aa	Known RBP	11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ZNF333	Q96JL9	665 aa		11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335	SPEF1	Q9Y4P9	236 aa		11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335		A0A1W2PQ67	120 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	FAM187A	A6NFU0	413 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	NT5C1B-RDH14	C9J2C7	533 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	PI4K2B	G5E9Z4	385 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	CST3	P01034	146 aa	Predicted RBP	11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	EDN1	P05305	212 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ICAM3	P32942	547 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ETFB	P38117	255 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	CHRDL2	Q6WN34	429 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	CALML6	Q8TD86	181 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	KLHL29	Q96CT2	875 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ANKRD36BP1	Q96IX9	119 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	CGRRF1	Q99675	332 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ADAM2	Q99965	735 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	RANBP2	P49792	3224 aa	Known RBP	11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	TTC28	Q96AY4	2481 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335		A0A0B4J269	797 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	B4GALT4	O60513	344 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	VNN1	O95497	513 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	POMC	P01189	267 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	TNNC2	P02585	160 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ETS2	P15036	469 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	POR	P16435	677 aa	Predicted RBP	11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	PBX3	P40426	434 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ORC1	Q13415	861 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	GNA13	Q14344	377 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ACAP1	Q15027	740 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	DUOXA2	Q1HG44	320 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	METTL21C	Q5VZV1	264 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	TMC3	Q7Z5M5	1100 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	CCDC197	Q8NCU1	140 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	MDM1	Q8TC05	714 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	NCOR1	O75376	2440 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	TOM1L1	O75674	476 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	FYN	P06241	537 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	TBXAS1	P24557	533 aa	Predicted RBP	11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	COIL	P38432	576 aa	Predicted RBP	11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	EFNA5	P52803	228 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	RAD23B	P54727	409 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	MAGOH	P61326	146 aa	Known RBP	11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	XRCC4	Q13426	336 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ZNF699	Q32M78	642 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ELAC2	Q9BQ52	826 aa	Known RBP	11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	SYT15	Q9BQS2	421 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	HAUS8	Q9BT25	410 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	MRPL47	Q9HD33	250 aa	Known RBP	11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	PCDHA3	Q9Y5H8	950 aa		11.7	□□□□□ -0.54
SUPT5H-216	ENST00000599335	RRN3P2	A6NIE6	340 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	LRRC72	A6NJI9	287 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	PODXL	O00592	558 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	KIAA0391	O15091	583 aa	Known RBP	11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	PMM2	O15305	246 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	PRL	P01236	227 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	UBL4A	P11441	157 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	SERPINB6	P35237	376 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	YARS	P54577	528 aa	Known RBP	11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	UAP1	Q16222	522 aa	Predicted RBP	11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ZNF618	Q5T7W0	954 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ARL6IP6	Q8N6S5	226 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	DDX1	Q92499	740 aa	Known RBP	11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ATP13A3	Q9H7F0	1226 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ETNK2	Q9NVF9	386 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	GGA2	Q9UJY4	613 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	B4GALT5	O43286	388 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	RPL21	P46778	160 aa	Known RBP	11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	KRT17	Q04695	432 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	TTC27	Q6P3X3	843 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	MAMDC4	Q6UXC1	1216 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ZC3H18	Q86VM9	953 aa	Known RBP	11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	MREG	Q8N565	214 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ACSF2	Q96CM8	615 aa	Predicted RBP	11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	PPCS	Q9HAB8	311 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ZC4H2	Q9NQZ6	224 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ATP8B3	O60423	1300 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ARVCF	O00192	962 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	MAF	O75444	373 aa	Predicted RBP	11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ACSL3	O95573	720 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ITGA2B	P08514	1039 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	CTNNA2	P26232	953 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ECHS1	P30084	290 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	PEX5	P50542	639 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	ZNF844	Q08AG5	666 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	MXD4	Q14582	209 aa	Predicted RBP	11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	LRRC26	Q2I0M4	334 aa		11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.69	□□□□□ -0.54
SUPT5H-216	ENST00000599335	DNAJC24	Q6P3W2	148 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms