RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 CA14Q9ULX7 337 aa21.17■□□□□ 0.98
PNKP-211ENST00000598020 PIAS3Q9Y6X2 628 aa21.17■□□□□ 0.98
PNKP-211ENST00000598020 SHISA7A6NL88 538 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 TMCO5BA8MYB1 307 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 MAN2B1O00754 1011 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 MYBL1P10243 752 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 KRT3P12035 628 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 RRM1P23921 792 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 RNASE9P60153 205 aaKnown RBP21.16■□□□□ 0.98
PNKP-211ENST00000598020 AMPD2Q01433 879 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 DHCR24Q15392 516 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 SLC25A52Q3SY17 297 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 PPP1R15BQ5SWA1 713 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 PLEKHA7Q6IQ23 1121 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 TRNP1Q6NT89 227 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 ALKBH5Q6P6C2 394 aaKnown RBP21.16■□□□□ 0.98
PNKP-211ENST00000598020 RHBDF2Q6PJF5 856 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 BNIPLQ7Z465 357 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 CPXM2Q8N436 756 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 ADAM32Q8TC27 787 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 TRIM11Q96F44 468 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 MYOFQ9NZM1 2061 aa21.16■□□□□ 0.98
PNKP-211ENST00000598020 TRIOO75962 3097 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 C2CD4BA6NLJ0 364 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 SCAMP3O14828 347 aaKnown RBP21.15■□□□□ 0.98
PNKP-211ENST00000598020 GPR37L1O60883 481 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 F9P00740 461 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 CYP17A1P05093 508 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 SLC2A3P11169 496 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 CTHP32929 405 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 CHKAP35790 457 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 SLC18A3Q16572 532 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 OTUD1Q5VV17 481 aaPredicted RBP21.15■□□□□ 0.98
PNKP-211ENST00000598020 DNAJC24Q6P3W2 148 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 PHLDB2Q86SQ0 1253 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 DENND1CQ8IV53 801 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 PANX2Q96RD6 677 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 CHP1Q99653 195 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 SELENOOQ9BVL4 669 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 C1QTNF1Q9BXJ1 281 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 IRX2Q9BZI1 471 aaPredicted RBP21.15■□□□□ 0.98
PNKP-211ENST00000598020 FAM204AQ9H8W3 233 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 C11orf16Q9NQ32 467 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 SPHK2Q9NRA0 654 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.15■□□□□ 0.98
PNKP-211ENST00000598020 DDIT4Q9NX09 232 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 MARK1Q9P0L2 795 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 IMPACTQ9P2X3 320 aa21.15■□□□□ 0.98
PNKP-211ENST00000598020 SPECC1L-ADORA2AF8WAN1 911 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 M0QYT0 321 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 ENDOD1O94919 500 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 ADH1CP00326 375 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 GJA4P35212 333 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 PTPN9P43378 593 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 MTA1Q13330 715 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 PPP2R5DQ14738 602 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 ZNF852Q6ZMS4 543 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 TPRG1Q6ZUI0 275 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 JOSD2Q8TAC2 188 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 CHFRQ96EP1 664 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 NELL2Q99435 816 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 ADAM33Q9BZ11 813 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 NHEJ1Q9H9Q4 299 aaPredicted RBP21.14■□□□□ 0.97
PNKP-211ENST00000598020 PARVAQ9NVD7 372 aa21.14■□□□□ 0.97
PNKP-211ENST00000598020 KANSL1LA0AUZ9 987 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 KCNU1A8MYU2 1149 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 GFRA2O00451 464 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 HOXC11O43248 304 aaPredicted RBP21.13■□□□□ 0.97
PNKP-211ENST00000598020 PDGFRAP16234 1089 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 FECHP22830 423 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 CCR1P32246 355 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 RFC1P35251 1148 aaPredicted RBP21.13■□□□□ 0.97
PNKP-211ENST00000598020 SOX9P48436 509 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 SLC11A2P49281 568 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 CXCR3P49682 368 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 MAMLD1Q13495 774 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 GAB4Q2WGN9 574 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 ZC3H12AQ5D1E8 599 aaKnown RBP21.13■□□□□ 0.97
PNKP-211ENST00000598020 LY6G5CQ5SRR4 150 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 CCDC122Q5T0U0 273 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 ADGRF1Q5T601 910 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 EMC1Q8N766 993 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 TTC8Q8TAM2 541 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 RXFP2Q8WXD0 754 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 CENPIQ92674 756 aaPredicted RBP21.13■□□□□ 0.97
PNKP-211ENST00000598020 CCDC42Q96M95 316 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 OSBPL6Q9BZF3 934 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 DEF6Q9H4E7 631 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 CALCOCO1Q9P1Z2 691 aa21.13■□□□□ 0.97
PNKP-211ENST00000598020 MRPS17Q9Y2R5 130 aaKnown RBP21.13■□□□□ 0.97
PNKP-211ENST00000598020 COL4A3Q01955 1670 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 AKR1B10O60218 316 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 ACSL4O60488 711 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 GJB6O95452 261 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 APOEP02649 317 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 TFE3P19532 575 aaPredicted RBP21.12■□□□□ 0.97
PNKP-211ENST00000598020 SDC4P31431 198 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 SULT1E1P49888 294 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 GAD2Q05329 585 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 GFPT1Q06210 699 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms