RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 DNAJC24Q6P3W2 148 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 KLHDC10Q6PID8 442 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 OLFML1Q6UWY5 402 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 SLC35G2Q8TBE7 412 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 FAM149B1Q96BN6 582 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 EBF3Q9H4W6 596 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 HEBP1Q9NRV9 189 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 MARCH2Q9P0N8 246 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 SALL4Q9UJQ4 1053 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 CA14Q9ULX7 337 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 WDFY4Q6ZS81 3184 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 NUP205Q92621 2012 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 CHADO15335 359 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 MSI1O43347 362 aaKnown RBP15.63■□□□□ 0.09
TRIM28-207ENST00000597136 GREM1O60565 184 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 NCAM1P13591 858 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 ARSAP15289 507 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 YWHAZP63104 245 aaKnown RBP15.63■□□□□ 0.09
TRIM28-207ENST00000597136 PPP1R15BQ5SWA1 713 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 TRIM67Q6ZTA4 783 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 RHOT2Q8IXI1 618 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 ADAM32Q8TC27 787 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 RNF139Q8WU17 664 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 NUP85Q9BW27 656 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 HPS4Q9NQG7 708 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 CTTNBP2NLQ9P2B4 639 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 UVRAGQ9P2Y5 699 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 GUCA1BQ9UMX6 200 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 SCINQ9Y6U3 715 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 KMT2EQ8IZD2 1858 aa15.63■□□□□ 0.09
TRIM28-207ENST00000597136 SLC12A8A0AV02 714 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 GOLGA6L9A6NEM1 432 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 SHISA7A6NL88 538 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 SIGLEC16A6NMB1 481 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 STC2O76061 302 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 GJB6O95452 261 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 KLKB1P03952 638 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 SCNN1AP37088 669 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 RNASE9P60153 205 aaKnown RBP15.62■□□□□ 0.09
TRIM28-207ENST00000597136 SIGLEC14Q08ET2 396 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 SLC44A4Q53GD3 710 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 FAM102AQ5T9C2 384 aaPredicted RBP15.62■□□□□ 0.09
TRIM28-207ENST00000597136 DEFB106AQ8N104 65 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 IRF7Q92985 503 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 MRPL47Q9HD33 250 aaKnown RBP15.62■□□□□ 0.09
TRIM28-207ENST00000597136 OSGEPQ9NPF4 335 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 C11orf16Q9NQ32 467 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 THG1LQ9NWX6 298 aaKnown RBP15.62■□□□□ 0.09
TRIM28-207ENST00000597136 DUS2Q9NX74 493 aaKnown RBP15.62■□□□□ 0.09
TRIM28-207ENST00000597136 MACROD2A1Z1Q3 448 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 FAM86C2PA6NEL3 165 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 MTA2O94776 668 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 KRT3P12035 628 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 CD72P21854 359 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 NOP2P46087 812 aaKnown RBP15.62■□□□□ 0.09
TRIM28-207ENST00000597136 SOX9P48436 509 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 RPL7AP62424 266 aaKnown RBP15.62■□□□□ 0.09
TRIM28-207ENST00000597136 EML3Q32P44 896 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 EFHC1Q5JVL4 640 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 TRNP1Q6NT89 227 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 CC2D1AQ6P1N0 951 aaPredicted RBP15.62■□□□□ 0.09
TRIM28-207ENST00000597136 MSANTD2Q6P1R3 559 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 SLC26A9Q7LBE3 791 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 BBS7Q8IWZ6 715 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 ADGRG2Q8IZP9 1017 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 RNF10Q8N5U6 811 aaKnown RBP15.62■□□□□ 0.09
TRIM28-207ENST00000597136 ZNF564Q8TBZ8 553 aaPredicted RBP15.62■□□□□ 0.09
TRIM28-207ENST00000597136 OSCP1Q8WVF1 389 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 SELENOOQ9BVL4 669 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 ADAM33Q9BZ11 813 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 POPDC2Q9HBU9 364 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 METTL5Q9NRN9 209 aaKnown RBP15.62■□□□□ 0.09
TRIM28-207ENST00000597136 WNT16Q9UBV4 365 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 TMEM59LQ9UK28 342 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 FBXL21Q9UKT6 434 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 PAXBP1Q9Y5B6 917 aa15.62■□□□□ 0.09
TRIM28-207ENST00000597136 E2F8A0AVK6 867 aa15.61■□□□□ 0.09
TRIM28-207ENST00000597136 TMEM191CA6NGB0 347 aa15.61■□□□□ 0.09
TRIM28-207ENST00000597136 SART1O43290 800 aaKnown RBP15.61■□□□□ 0.09
TRIM28-207ENST00000597136 BUB1O43683 1085 aa15.61■□□□□ 0.09
TRIM28-207ENST00000597136 HADHBP55084 474 aaKnown RBP15.61■□□□□ 0.09
TRIM28-207ENST00000597136 DCAF6Q58WW2 860 aa15.61■□□□□ 0.09
TRIM28-207ENST00000597136 HTR3DQ70Z44 454 aa15.61■□□□□ 0.09
TRIM28-207ENST00000597136 TADA2BQ86TJ2 420 aa15.61■□□□□ 0.09
TRIM28-207ENST00000597136 SIX5Q8N196 739 aa15.61■□□□□ 0.09
TRIM28-207ENST00000597136 DQX1Q8TE96 717 aaKnown RBP15.61■□□□□ 0.09
TRIM28-207ENST00000597136 GOLGA1Q92805 767 aa15.61■□□□□ 0.09
TRIM28-207ENST00000597136 MCEEQ96PE7 176 aa15.61■□□□□ 0.09
TRIM28-207ENST00000597136 CDK5RAP1Q96SZ6 601 aaKnown RBP15.61■□□□□ 0.09
TRIM28-207ENST00000597136 TRIM7Q9C029 511 aa15.61■□□□□ 0.09
TRIM28-207ENST00000597136 OLA1Q9NTK5 396 aaKnown RBP15.61■□□□□ 0.09
TRIM28-207ENST00000597136 SH3BP1Q9Y3L3 701 aa15.61■□□□□ 0.09
TRIM28-207ENST00000597136 TMEM221A6NGB7 291 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 M0R296 226 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 CAPN9O14815 690 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 GLI1P08151 1106 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 TFE3P19532 575 aaPredicted RBP15.6■□□□□ 0.09
TRIM28-207ENST00000597136 RFC1P35251 1148 aaPredicted RBP15.6■□□□□ 0.09
TRIM28-207ENST00000597136 IFNAR2P48551 515 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 NAP1L1P55209 391 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms