RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CSH1P0DML2 217 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 CSH2P0DML3 217 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 ZFXP17010 805 aaPredicted RBP23.47■■□□□ 1.35
SRRM1-222ENST00000596378 WARSP23381 471 aaKnown RBP23.47■■□□□ 1.35
SRRM1-222ENST00000596378 MDH1BQ5I0G3 518 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 SYPL2Q5VXT5 272 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 ASRGL1Q7L266 308 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 LRRC37BQ96QE4 947 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 HNRNPABQ99729 332 aaKnown RBP23.47■■□□□ 1.35
SRRM1-222ENST00000596378 FRMD8Q9BZ67 464 aaPredicted RBP23.47■■□□□ 1.35
SRRM1-222ENST00000596378 AP5M1Q9H0R1 490 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 MANSC1Q9H8J5 431 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 ARHGEF4Q9NR80 690 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 DCTN4Q9UJW0 460 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 STK38LQ9Y2H1 464 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 CHUKO15111 745 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 APOEP02649 317 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 ALADP13716 330 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 PTPN1P18031 435 aaKnown RBP23.47■■□□□ 1.35
SRRM1-222ENST00000596378 ARL4AP40617 200 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 ETV4P43268 484 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 MAGEA3P43357 314 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 NR2C2P49116 596 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 SLC18A2Q05940 514 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 NME3Q13232 169 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 SETDB1Q15047 1291 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 MCUQ8NE86 351 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 RFWD2Q8NHY2 731 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 NOD2Q9HC29 1040 aa23.47■■□□□ 1.35
SRRM1-222ENST00000596378 BRCA2P51587 3418 aa23.46■■□□□ 1.35
SRRM1-222ENST00000596378 MYADML2A6NDP7 307 aa23.46■■□□□ 1.35
SRRM1-222ENST00000596378 NPR3P17342 541 aa23.46■■□□□ 1.35
SRRM1-222ENST00000596378 TARSP26639 723 aaKnown RBP23.46■■□□□ 1.35
SRRM1-222ENST00000596378 MAP3K7CLP57077 242 aa23.46■■□□□ 1.35
SRRM1-222ENST00000596378 MRPS5P82675 430 aaKnown RBP23.46■■□□□ 1.35
SRRM1-222ENST00000596378 TTC39BQ5VTQ0 682 aaPredicted RBP23.46■■□□□ 1.35
SRRM1-222ENST00000596378 CLEC20AQ6ZU45 233 aa23.46■■□□□ 1.35
SRRM1-222ENST00000596378 CTU1Q7Z7A3 348 aaKnown RBP23.46■■□□□ 1.35
SRRM1-222ENST00000596378 TOP6BLQ8N6T0 577 aa23.46■■□□□ 1.35
SRRM1-222ENST00000596378 TFB1MQ8WVM0 346 aaKnown RBP23.46■■□□□ 1.35
SRRM1-222ENST00000596378 HTR3CQ8WXA8 447 aa23.46■■□□□ 1.35
SRRM1-222ENST00000596378 OLFM3Q96PB7 478 aa23.46■■□□□ 1.35
SRRM1-222ENST00000596378 MED10Q9BTT4 135 aa23.46■■□□□ 1.35
SRRM1-222ENST00000596378 VPS11Q9H270 941 aa23.46■■□□□ 1.35
SRRM1-222ENST00000596378 ARHGEF3Q9NR81 526 aa23.46■■□□□ 1.35
SRRM1-222ENST00000596378 GTF2IRD1Q9UHL9 959 aa23.46■■□□□ 1.35
SRRM1-222ENST00000596378 TIMM13Q9Y5L4 95 aaPredicted RBP23.46■■□□□ 1.35
SRRM1-222ENST00000596378 NUMBLQ9Y6R0 609 aa23.46■■□□□ 1.35
SRRM1-222ENST00000596378 CREB3O43889 395 aa23.45■■□□□ 1.35
SRRM1-222ENST00000596378 UNC5CO95185 931 aa23.45■■□□□ 1.35
SRRM1-222ENST00000596378 CCNB1P14635 433 aa23.45■■□□□ 1.35
SRRM1-222ENST00000596378 PRKCHP24723 683 aa23.45■■□□□ 1.35
SRRM1-222ENST00000596378 CRADDP78560 199 aa23.45■■□□□ 1.35
SRRM1-222ENST00000596378 TP53INP2Q8IXH6 220 aa23.45■■□□□ 1.35
SRRM1-222ENST00000596378 ADAM32Q8TC27 787 aa23.45■■□□□ 1.35
SRRM1-222ENST00000596378 TMEM237Q96Q45 408 aa23.45■■□□□ 1.35
SRRM1-222ENST00000596378 PPP1R10Q96QC0 940 aaKnown RBP23.45■■□□□ 1.35
SRRM1-222ENST00000596378 M0QYT0 321 aa23.45■■□□□ 1.34
SRRM1-222ENST00000596378 DAB1O75553 588 aa23.45■■□□□ 1.34
SRRM1-222ENST00000596378 DGKIO75912 1065 aa23.45■■□□□ 1.34
SRRM1-222ENST00000596378 DHRS4L1P0CG22 281 aa23.45■■□□□ 1.34
SRRM1-222ENST00000596378 BGNP21810 368 aa23.45■■□□□ 1.34
SRRM1-222ENST00000596378 CBLBQ13191 982 aa23.45■■□□□ 1.34
SRRM1-222ENST00000596378 FSCN1Q16658 493 aaKnown RBP23.45■■□□□ 1.34
SRRM1-222ENST00000596378 ANKRD20A2Q5SQ80 823 aa23.45■■□□□ 1.34
SRRM1-222ENST00000596378 ANKRD20A1Q5TYW2 823 aa23.45■■□□□ 1.34
SRRM1-222ENST00000596378 ANKRD20A3Q5VUR7 823 aa23.45■■□□□ 1.34
SRRM1-222ENST00000596378 UNC5BQ8IZJ1 945 aa23.45■■□□□ 1.34
SRRM1-222ENST00000596378 RNF169Q8NCN4 708 aa23.45■■□□□ 1.34
SRRM1-222ENST00000596378 TPSB2P20231 275 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 IBSPP21815 317 aaPredicted RBP23.44■■□□□ 1.34
SRRM1-222ENST00000596378 MLH1P40692 756 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 PURAQ00577 322 aaKnown RBP23.44■■□□□ 1.34
SRRM1-222ENST00000596378 TPSAB1Q15661 275 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 RNF139Q8WU17 664 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 SRPK1Q96SB4 655 aaKnown RBP23.44■■□□□ 1.34
SRRM1-222ENST00000596378 EBNA1BP2Q99848 306 aaKnown RBP23.44■■□□□ 1.34
SRRM1-222ENST00000596378 LRRC4Q9HBW1 653 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 KRT82Q9NSB4 513 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 KANSL3Q9P2N6 904 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 NRP1O14786 923 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 AP1B1Q10567 949 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 SEMA5AQ13591 1074 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 FYB2Q5VWT5 728 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 NLRP9Q7RTR0 991 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 CEP57Q86XR8 500 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 SIX6OS1Q8N1H7 587 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 LPPQ93052 612 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 TBC1D31Q96DN5 1066 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 CRTAC1Q9NQ79 661 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 PIGVQ9NUD9 493 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 SEPT10Q9P0V9 454 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 HAO1Q9UJM8 370 aa23.44■■□□□ 1.34
SRRM1-222ENST00000596378 COPEO14579 308 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 LRPAP1P30533 357 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 TKTL1P51854 596 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 SLC8A3P57103 927 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 E2F5Q15329 346 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 TAF1CQ15572 869 aaPredicted RBP23.43■■□□□ 1.34
SRRM1-222ENST00000596378 SMAD1Q15797 465 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms