RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 YWHAZP63104 245 aaKnown RBP20.46■□□□□ 0.87
LSM4-203ENST00000593829 EML3Q32P44 896 aa20.46■□□□□ 0.87
LSM4-203ENST00000593829 ITPRIPL2Q3MIP1 535 aa20.46■□□□□ 0.87
LSM4-203ENST00000593829 EFHC1Q5JVL4 640 aa20.46■□□□□ 0.87
LSM4-203ENST00000593829 FAM183BPQ6ZVS7 135 aa20.46■□□□□ 0.87
LSM4-203ENST00000593829 BEND5Q7L4P6 421 aa20.46■□□□□ 0.87
LSM4-203ENST00000593829 ZDHHC17Q8IUH5 632 aa20.46■□□□□ 0.87
LSM4-203ENST00000593829 CPLX3Q8WVH0 158 aa20.46■□□□□ 0.87
LSM4-203ENST00000593829 C18orf8Q96DM3 657 aa20.46■□□□□ 0.87
LSM4-203ENST00000593829 CAPN11Q9UMQ6 739 aa20.46■□□□□ 0.87
LSM4-203ENST00000593829 PIAS3Q9Y6X2 628 aa20.46■□□□□ 0.87
LSM4-203ENST00000593829 SLC12A8A0AV02 714 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 GLI1P08151 1106 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 ARSAP15289 507 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 GABRB2P47870 512 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 STARD6P59095 220 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 MSANTD2Q6P1R3 559 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 TPRG1Q6ZUI0 275 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 TTC8Q8TAM2 541 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 PCDHB18PQ96TA0 734 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 C8orf33Q9H7E9 229 aaPredicted RBP20.45■□□□□ 0.86
LSM4-203ENST00000593829 POPDC2Q9HBU9 364 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 SEPT11Q9NVA2 429 aaKnown RBP20.45■□□□□ 0.86
LSM4-203ENST00000593829 ASNSD1Q9NWL6 643 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 LSM7Q9UK45 103 aaKnown RBP20.45■□□□□ 0.86
LSM4-203ENST00000593829 LUC7L2Q9Y383 392 aaKnown RBP20.45■□□□□ 0.86
LSM4-203ENST00000593829 CAPN9O14815 690 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 SCAMP3O14828 347 aaKnown RBP20.45■□□□□ 0.86
LSM4-203ENST00000593829 PDGFBP01127 241 aaPredicted RBP20.45■□□□□ 0.86
LSM4-203ENST00000593829 FYNP06241 537 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 ACTN2P35609 894 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 ZBED6P86452 979 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 SLC6A3Q01959 620 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 HTR3DQ70Z44 454 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 CPA6Q8N4T0 437 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 WBP2Q969T9 261 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 OTUB2Q96DC9 234 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 PIWIL1Q96J94 861 aaKnown RBP20.45■□□□□ 0.86
LSM4-203ENST00000593829 IRX2Q9BZI1 471 aaPredicted RBP20.45■□□□□ 0.86
LSM4-203ENST00000593829 LZTFL1Q9NQ48 299 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 SFMBT1Q9UHJ3 866 aa20.45■□□□□ 0.86
LSM4-203ENST00000593829 STK25O00506 426 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 GREM1O60565 184 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 STC2O76061 302 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 NFATC1O95644 943 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 GYPCP04921 128 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 UNGP13051 313 aaPredicted RBP20.44■□□□□ 0.86
LSM4-203ENST00000593829 TAF5Q15542 800 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 CLEC16AQ2KHT3 1053 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 ZNF569Q5MCW4 686 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 OLFML1Q6UWY5 402 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 SYN2Q92777 582 aaPredicted RBP20.44■□□□□ 0.86
LSM4-203ENST00000593829 MSANTD3Q96H12 275 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 NAPGQ99747 312 aaPredicted RBP20.44■□□□□ 0.86
LSM4-203ENST00000593829 ECT2Q9H8V3 914 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 TBC1D17Q9HA65 648 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 NAALADL1Q9UQQ1 740 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 HBS1LQ9Y450 684 aaKnown RBP20.44■□□□□ 0.86
LSM4-203ENST00000593829 TICRRQ7Z2Z1 1910 aa20.44■□□□□ 0.86
LSM4-203ENST00000593829 COL4A2P08572 1712 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 FAM170AA1A519 330 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 MAN2B1O00754 1011 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 HSF2BPO75031 334 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 IVLP07476 585 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 HMBSP08397 361 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 PRKCIP41743 596 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 KLHL30Q0D2K2 578 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 NR1H3Q13133 447 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 ZNF852Q6ZMS4 543 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 ADGRG2Q8IZP9 1017 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 FLCNQ8NFG4 579 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 SLC30A5Q8TAD4 765 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 DDX23Q9BUQ8 820 aaKnown RBP20.43■□□□□ 0.86
LSM4-203ENST00000593829 HAUS4Q9H6D7 363 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 OTOL1A6NHN0 477 aaPredicted RBP20.43■□□□□ 0.86
LSM4-203ENST00000593829 TNFAIP3P21580 790 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 MMP8P22894 467 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 NSFP46459 744 aaKnown RBP20.43■□□□□ 0.86
LSM4-203ENST00000593829 CENPCQ03188 943 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 WDR93Q6P2C0 686 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 C1orf228Q6PIY5 440 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 SLC26A9Q7LBE3 791 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 RALGPS2Q86X27 583 aaPredicted RBP20.43■□□□□ 0.86
LSM4-203ENST00000593829 BBS7Q8IWZ6 715 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 FBXL6Q8N531 539 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 PLD4Q96BZ4 506 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 PNKPQ96T60 521 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 SYT11Q9BT88 431 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 DCLK3Q9C098 648 aa20.43■□□□□ 0.86
LSM4-203ENST00000593829 KANSL1LA0AUZ9 987 aa20.42■□□□□ 0.86
LSM4-203ENST00000593829 SPECC1L-ADORA2AF8WAN1 911 aa20.42■□□□□ 0.86
LSM4-203ENST00000593829 CASP14P31944 242 aa20.42■□□□□ 0.86
LSM4-203ENST00000593829 SCNN1AP37088 669 aa20.42■□□□□ 0.86
LSM4-203ENST00000593829 SOX9P48436 509 aa20.42■□□□□ 0.86
LSM4-203ENST00000593829 C2CD6Q53TS8 623 aa20.42■□□□□ 0.86
LSM4-203ENST00000593829 SYPL2Q5VXT5 272 aa20.42■□□□□ 0.86
LSM4-203ENST00000593829 MMS22LQ6ZRQ5 1243 aa20.42■□□□□ 0.86
LSM4-203ENST00000593829 XYLT1Q86Y38 959 aa20.42■□□□□ 0.86
LSM4-203ENST00000593829 SLC35F6Q8N357 371 aa20.42■□□□□ 0.86
LSM4-203ENST00000593829 DQX1Q8TE96 717 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms