RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ZNF510Q9Y2H8 683 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 PCDHB9Q9Y5E1 797 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 STON1Q9Y6Q2 735 aa15.48■□□□□ 0.07
PNKP-202ENST00000593706 GOLGA4Q13439 2230 aaKnown RBP15.48■□□□□ 0.07
PNKP-202ENST00000593706 SRRM3A6NNA2 597 aaPredicted RBP15.47■□□□□ 0.07
PNKP-202ENST00000593706 PLXNA2O75051 1894 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 CD6P30203 668 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 CHKAP35790 457 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 GCLMP48507 274 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 KIF11P52732 1056 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 FAM193AP78312 1265 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 ENPEPQ07075 957 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 EFEMP1Q12805 493 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 ZNF423Q2M1K9 1284 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 FUT11Q495W5 492 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 INTS8Q75QN2 995 aaKnown RBP15.47■□□□□ 0.07
PNKP-202ENST00000593706 CCDC186Q7Z3E2 898 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 TAS1R2Q8TE23 839 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 UCMAQ8WVF2 138 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 TIGD1Q96MW7 591 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 PRDM16Q9HAZ2 1276 aa15.47■□□□□ 0.07
PNKP-202ENST00000593706 FASNP49327 2511 aaKnown RBP15.46■□□□□ 0.07
PNKP-202ENST00000593706 SYNCRIPO60506 623 aaKnown RBP15.46■□□□□ 0.07
PNKP-202ENST00000593706 CILPO75339 1184 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 CYBBP04839 570 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 CISD3P0C7P0 127 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 CD59P13987 128 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 MAOBP27338 520 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 CORO1AP31146 461 aaKnown RBP15.46■□□□□ 0.07
PNKP-202ENST00000593706 MFAP3P55082 362 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 COG7P83436 770 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 GRIK2Q13002 908 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 SLC14A1Q13336 389 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 EDRF1Q3B7T1 1238 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 ZNF394Q53GI3 561 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 RSRC2Q7L4I2 434 aaKnown RBP15.46■□□□□ 0.07
PNKP-202ENST00000593706 ANKS1BQ7Z6G8 1248 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 SCD5Q86SK9 330 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 CACUL1Q86Y37 369 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 NAXDQ8IW45 347 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 ZC3H3Q8IXZ2 948 aaKnown RBP15.46■□□□□ 0.07
PNKP-202ENST00000593706 ELOA2Q8IYF1 753 aaPredicted RBP15.46■□□□□ 0.07
PNKP-202ENST00000593706 FAM186BQ8IYM0 893 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 CHCHD4Q8N4Q1 142 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 TOE1Q96GM8 510 aaKnown RBP15.46■□□□□ 0.07
PNKP-202ENST00000593706 ZNF419Q96HQ0 510 aaPredicted RBP15.46■□□□□ 0.07
PNKP-202ENST00000593706 GSDMAQ96QA5 445 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 DUSP16Q9BY84 665 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 DCLK3Q9C098 648 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 MIR1-1HGQ9H1L0 117 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 APOBEC3GQ9HC16 384 aaKnown RBP15.46■□□□□ 0.07
PNKP-202ENST00000593706 CLIC5Q9NZA1 410 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 SLC27A6Q9Y2P4 619 aa15.46■□□□□ 0.07
PNKP-202ENST00000593706 NPC1O15118 1278 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 SH3BP5O60239 455 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 PENKP01210 267 aaPredicted RBP15.45■□□□□ 0.06
PNKP-202ENST00000593706 NCAM1P13591 858 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 IL12RB1P42701 662 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 ARID5AQ03989 594 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 PPP3CAQ08209 521 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 E2F5Q15329 346 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 TRIP6Q15654 476 aaKnown RBP15.45■□□□□ 0.06
PNKP-202ENST00000593706 GEN1Q17RS7 908 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 PPP1R26Q5T8A7 1209 aaPredicted RBP15.45■□□□□ 0.06
PNKP-202ENST00000593706 ARHGAP18Q8N392 663 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 ZCCHC9Q8N567 271 aaKnown RBP15.45■□□□□ 0.06
PNKP-202ENST00000593706 ERCC4Q92889 916 aaPredicted RBP15.45■□□□□ 0.06
PNKP-202ENST00000593706 CAMK1GQ96NX5 476 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 GPR174Q9BXC1 333 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 ZDHHC5Q9C0B5 715 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 STRIP2Q9ULQ0 834 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 IGSF10Q6WRI0 2623 aa15.45■□□□□ 0.06
PNKP-202ENST00000593706 APC2O95996 2303 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 A0A1B0GTW7 788 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 GOLGA6L4A6NEF3 574 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 GADD45BO75293 160 aaPredicted RBP15.44■□□□□ 0.06
PNKP-202ENST00000593706 KLKB1P03952 638 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 ACADMP11310 421 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 RPL13P26373 211 aaKnown RBP15.44■□□□□ 0.06
PNKP-202ENST00000593706 PSMC2P35998 433 aaKnown RBP15.44■□□□□ 0.06
PNKP-202ENST00000593706 PRCPP42785 496 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 ZNF132P52740 706 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 SLC8A3P57103 927 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 ZNF658Q5TYW1 1059 aaPredicted RBP15.44■□□□□ 0.06
PNKP-202ENST00000593706 FYB2Q5VWT5 728 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 DENND1CQ8IV53 801 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 ZNF276Q8N554 614 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 DDI1Q8WTU0 396 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 PRCCQ92733 491 aaPredicted RBP15.44■□□□□ 0.06
PNKP-202ENST00000593706 SIPA1Q96FS4 1042 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 CCDC34Q96HJ3 373 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 HEXIM2Q96MH2 286 aaKnown RBP15.44■□□□□ 0.06
PNKP-202ENST00000593706 CIPCQ9C0C6 399 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 MKRN2Q9H000 416 aaKnown RBP15.44■□□□□ 0.06
PNKP-202ENST00000593706 TMEM8AQ9HCN3 771 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 RMND1Q9NWS8 449 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 MARCH2Q9P0N8 246 aa15.44■□□□□ 0.06
PNKP-202ENST00000593706 USP36Q9P275 1121 aaKnown RBP15.44■□□□□ 0.06
PNKP-202ENST00000593706 THAP10Q9P2Z0 257 aaPredicted RBP15.44■□□□□ 0.06
PNKP-202ENST00000593706 FBXO10Q9UK96 956 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms