RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 CYBBP04839 570 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 CHRM1P11229 460 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-233ENST00000591622 KIR2DL1P43626 348 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-233ENST00000591622 ZNF165P49910 485 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 SNX16P57768 344 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 RING1Q06587 406 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 DMC1Q14565 340 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 EMC10Q5UCC4 262 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 SYPL2Q5VXT5 272 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 DHX40Q8IX18 779 aaKnown RBP17.1■□□□□ 0.33
CIRBP-233ENST00000591622 SUMF1Q8NBK3 374 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 FUCA2Q9BTY2 467 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 EPC1Q9H2F5 836 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 PDCL3Q9H2J4 239 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 POPDC2Q9HBU9 364 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 STOML2Q9UJZ1 356 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 FBXO10Q9UK96 956 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 CCDC163A0A0D9SF12 145 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 SYCE3A1L190 88 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 GLI1P08151 1106 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 CISD3P0C7P0 127 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 CDH5P33151 784 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-233ENST00000591622 CNR2P34972 360 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 TIE1P35590 1138 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 PXNP49023 591 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-233ENST00000591622 DGKGP49619 791 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 TBX4P57082 545 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 JAM2P57087 298 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 NNTQ13423 1086 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 TAF5Q15542 800 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 HSF5Q4G112 596 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-233ENST00000591622 EFHC1Q5JVL4 640 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 C10orf76Q5T2E6 689 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 ADGRF1Q5T601 910 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 NUGGCQ68CJ6 796 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 NOP9Q86U38 636 aaKnown RBP17.09■□□□□ 0.33
CIRBP-233ENST00000591622 WDR5BQ86VZ2 330 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 UNC45BQ8IWX7 931 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 CCDC33Q8N5R6 958 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 ALLCQ8N6M5 410 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 IL17RCQ8NAC3 791 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 TMEM35BQ8NCS4 154 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 KCNV2Q8TDN2 545 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 DDX1Q92499 740 aaKnown RBP17.09■□□□□ 0.33
CIRBP-233ENST00000591622 PIWIL1Q96J94 861 aaKnown RBP17.09■□□□□ 0.33
CIRBP-233ENST00000591622 PCMTD1Q96MG8 357 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-233ENST00000591622 SERPINB11Q96P15 392 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 ERGIC2Q96RQ1 377 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 NLRC4Q9NPP4 1024 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 MMP17Q9ULZ9 603 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 TLR6Q9Y2C9 796 aa17.09■□□□□ 0.33
CIRBP-233ENST00000591622 GFPT2O94808 682 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 ERBB2P04626 1255 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 ZNF445P59923 1031 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 PTPN20Q4JDL3 420 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 MPPE1Q53F39 396 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 TAF3Q5VWG9 929 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 TOGARAM2Q6ZUX3 1019 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 TXNDC5Q8NBS9 432 aaKnown RBP17.08■□□□□ 0.32
CIRBP-233ENST00000591622 NEK11Q8NG66 645 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 ADAM32Q8TC27 787 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 EPS8L1Q8TE68 723 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 IPO4Q8TEX9 1081 aaKnown RBP17.08■□□□□ 0.32
CIRBP-233ENST00000591622 DDI1Q8WTU0 396 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 AZIN2Q96A70 460 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 HHIPQ96QV1 700 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 SPAG5Q96R06 1193 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 SYNCQ9H7C4 482 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 ASNSD1Q9NWL6 643 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 STARD13Q9Y3M8 1113 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 PIEZO1Q92508 2521 aa17.08■□□□□ 0.32
CIRBP-233ENST00000591622 PRRT4C9JH25 899 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 GFRA2O00451 464 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 HRO43593 1189 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 HSF2BPO75031 334 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 KLF8O95600 359 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-233ENST00000591622 APBB3O95704 486 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 LSM8O95777 96 aaKnown RBP17.07■□□□□ 0.32
CIRBP-233ENST00000591622 SOX5P35711 763 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 SLC11A2P49281 568 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 CRY1Q16526 586 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 DCAF6Q58WW2 860 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 OR6B2Q6IFH4 312 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 OLFML1Q6UWY5 402 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 FAM183BPQ6ZVS7 135 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 TAC4Q86UU9 113 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 ZNF677Q86XU0 584 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 ZDHHC17Q8IUH5 632 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 ZNF513Q8N8E2 541 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-233ENST00000591622 SLC39A13Q96H72 371 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 FCRL2Q96LA5 508 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-233ENST00000591622 SLC2A13Q96QE2 648 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 SLC2A11Q9BYW1 496 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 EBF1Q9UH73 591 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 NOCTQ9UK39 431 aaKnown RBP17.07■□□□□ 0.32
CIRBP-233ENST00000591622 SLC27A6Q9Y2P4 619 aa17.07■□□□□ 0.32
CIRBP-233ENST00000591622 KIAA1549LQ6ZVL6 1849 aa17.06■□□□□ 0.32
CIRBP-233ENST00000591622 SGK1O00141 431 aa17.06■□□□□ 0.32
CIRBP-233ENST00000591622 ACSL4O60488 711 aa17.06■□□□□ 0.32
CIRBP-233ENST00000591622 TSPAN3O60637 253 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms