RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 TMPRSS4Q9NRS4 437 aa18.11■□□□□ 0.49
CXXC1-212ENST00000589940 UXTQ9UBK9 157 aaPredicted RBP18.11■□□□□ 0.49
CXXC1-212ENST00000589940 ZNF840PA6NDX5 716 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 TLR5O60602 858 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 C1RP00736 705 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 CHRNA3P32297 505 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 EFEMP1Q12805 493 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 BRMS1LQ5PSV4 323 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 C10orf120Q5SQS8 335 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 RFX6Q8HWS3 928 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 MAGOHBQ96A72 148 aaKnown RBP18.1■□□□□ 0.49
CXXC1-212ENST00000589940 FAF2Q96CS3 445 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 MAK16Q9BXY0 300 aaKnown RBP18.1■□□□□ 0.49
CXXC1-212ENST00000589940 MAGEB5Q9BZ81 275 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 NKX2-4Q9H2Z4 354 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 ANLNQ9NQW6 1124 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 HOMER3Q9NSC5 361 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.1■□□□□ 0.49
CXXC1-212ENST00000589940 TRPM5Q9NZQ8 1165 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 I6L893 689 aaPredicted RBP18.1■□□□□ 0.49
CXXC1-212ENST00000589940 CST8O60676 142 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 TBX18O95935 607 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 LRG1P02750 347 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 CCR1P32246 355 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 PPP3CCP48454 512 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 NNTQ13423 1086 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 PPP2R5DQ14738 602 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 ANKRD20A8PQ5CZ79 823 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 PPP2R2DQ66LE6 453 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 TADA2BQ86TJ2 420 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 PYROXD2Q8N2H3 581 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 RNF157Q96PX1 679 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 EPC1Q9H2F5 836 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 LRRC19Q9H756 370 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 CCSER2Q9H7U1 834 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 ANKZF1Q9H8Y5 726 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 ARHGEF38Q9NXL2 777 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 RCOR3Q9P2K3 495 aaPredicted RBP18.1■□□□□ 0.49
CXXC1-212ENST00000589940 TLR6Q9Y2C9 796 aa18.1■□□□□ 0.49
CXXC1-212ENST00000589940 R3HDM2Q9Y2K5 976 aaKnown RBP18.1■□□□□ 0.49
CXXC1-212ENST00000589940 BMP8BP34820 402 aa18.09■□□□□ 0.49
CXXC1-212ENST00000589940 FNTAP49354 379 aa18.09■□□□□ 0.49
CXXC1-212ENST00000589940 TFDP2Q14188 446 aa18.09■□□□□ 0.49
CXXC1-212ENST00000589940 C1orf54Q8WWF1 131 aa18.09■□□□□ 0.49
CXXC1-212ENST00000589940 DCLK3Q9C098 648 aa18.09■□□□□ 0.49
CXXC1-212ENST00000589940 CERS4Q9HA82 394 aa18.09■□□□□ 0.49
CXXC1-212ENST00000589940 MARCH2Q9P0N8 246 aa18.09■□□□□ 0.49
CXXC1-212ENST00000589940 TNRC18O15417 2968 aaPredicted RBP18.09■□□□□ 0.49
CXXC1-212ENST00000589940 ARL4AP40617 200 aa18.08■□□□□ 0.49
CXXC1-212ENST00000589940 DYNLT1P63172 113 aa18.08■□□□□ 0.49
CXXC1-212ENST00000589940 CCNG2Q16589 344 aa18.08■□□□□ 0.49
CXXC1-212ENST00000589940 RTL10Q7L3V2 364 aa18.08■□□□□ 0.49
CXXC1-212ENST00000589940 CCDC26Q8TAB7 109 aa18.08■□□□□ 0.49
CXXC1-212ENST00000589940 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.08■□□□□ 0.49
CXXC1-212ENST00000589940 ATG4AQ8WYN0 398 aa18.08■□□□□ 0.49
CXXC1-212ENST00000589940 SLC39A13Q96H72 371 aa18.08■□□□□ 0.49
CXXC1-212ENST00000589940 CSPG4P5Q96PW8 444 aa18.08■□□□□ 0.49
CXXC1-212ENST00000589940 CWC15Q9P013 229 aaKnown RBP18.08■□□□□ 0.49
CXXC1-212ENST00000589940 AMACRQ9UHK6 382 aa18.08■□□□□ 0.49
CXXC1-212ENST00000589940 TARSL2A2RTX5 802 aaKnown RBP18.08■□□□□ 0.48
CXXC1-212ENST00000589940 RAD51CO43502 376 aa18.08■□□□□ 0.48
CXXC1-212ENST00000589940 SLC2A3P11169 496 aa18.08■□□□□ 0.48
CXXC1-212ENST00000589940 COILP38432 576 aaPredicted RBP18.08■□□□□ 0.48
CXXC1-212ENST00000589940 TUBP50607 506 aa18.08■□□□□ 0.48
CXXC1-212ENST00000589940 MRPS25P82663 173 aaKnown RBP18.08■□□□□ 0.48
CXXC1-212ENST00000589940 HECTD3Q5T447 861 aa18.08■□□□□ 0.48
CXXC1-212ENST00000589940 TTC27Q6P3X3 843 aa18.08■□□□□ 0.48
CXXC1-212ENST00000589940 CCDC137Q6PK04 289 aaKnown RBP18.08■□□□□ 0.48
CXXC1-212ENST00000589940 MAATS1Q7Z4T9 603 aa18.08■□□□□ 0.48
CXXC1-212ENST00000589940 PCDH19Q8TAB3 1148 aa18.08■□□□□ 0.48
CXXC1-212ENST00000589940 RUNDC3BQ96NL0 473 aa18.08■□□□□ 0.48
CXXC1-212ENST00000589940 PLEKHA4Q9H4M7 779 aa18.08■□□□□ 0.48
CXXC1-212ENST00000589940 PCYOX1Q9UHG3 505 aa18.08■□□□□ 0.48
CXXC1-212ENST00000589940 RASAL2Q9UJF2 1139 aa18.08■□□□□ 0.48
CXXC1-212ENST00000589940 CLASP2O75122 1294 aaKnown RBP18.07■□□□□ 0.48
CXXC1-212ENST00000589940 GOT1P17174 413 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 TBX4P57082 545 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 SEMA3BQ13214 749 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 TRIP4Q15650 581 aaPredicted RBP18.07■□□□□ 0.48
CXXC1-212ENST00000589940 KLHDC10Q6PID8 442 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 MIB1Q86YT6 1006 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 ELMOD1Q8N336 334 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 PQLC3Q8N755 202 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 TTC13Q8NBP0 860 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 HDAC7Q8WUI4 952 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 ARNTL2Q8WYA1 636 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 SLC28A3Q9HAS3 691 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 ZNF334Q9HCZ1 680 aaPredicted RBP18.07■□□□□ 0.48
CXXC1-212ENST00000589940 KCNU1A8MYU2 1149 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 H3BRJ5 948 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 APOC4-APOC2K7ER74 178 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 APOC2P02655 101 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 ATP5C1P36542 298 aaKnown RBP18.07■□□□□ 0.48
CXXC1-212ENST00000589940 ZNF135P52742 658 aaPredicted RBP18.07■□□□□ 0.48
CXXC1-212ENST00000589940 DHX34Q14147 1143 aaKnown RBP18.07■□□□□ 0.48
CXXC1-212ENST00000589940 PPM1LQ5SGD2 360 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 SLC9A4Q6AI14 798 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 TDHQ8IZJ6 230 aa18.07■□□□□ 0.48
CXXC1-212ENST00000589940 FCRL2Q96LA5 508 aaPredicted RBP18.07■□□□□ 0.48
CXXC1-212ENST00000589940 HAPLN3Q96S86 360 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms