RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 TRIM7Q9C029 511 aa14.18□□□□□ -0.14
VMP1-210ENST00000589823 DCLK3Q9C098 648 aa14.18□□□□□ -0.14
VMP1-210ENST00000589823 OSGEPQ9NPF4 335 aa14.18□□□□□ -0.14
VMP1-210ENST00000589823 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.18□□□□□ -0.14
VMP1-210ENST00000589823 SLC12A6Q9UHW9 1150 aa14.18□□□□□ -0.14
VMP1-210ENST00000589823 E2F8A0AVK6 867 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 RCCD1A6NED2 376 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 LOC730098B7Z3J9 87 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 KRT86O43790 486 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 ENDOD1O94919 500 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 SLC2A3P11169 496 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 FCARP24071 287 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 CCR1P32246 355 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 ARHGAP25P42331 645 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 NAP1L1P55209 391 aaKnown RBP14.17□□□□□ -0.14
VMP1-210ENST00000589823 ZXDBP98169 803 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 OGDHQ02218 1023 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 RING1Q06587 406 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 ACAP1Q15027 740 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 ZNF77Q15935 545 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 IFI16Q16666 785 aaKnown RBP14.17□□□□□ -0.14
VMP1-210ENST00000589823 BRMS1LQ5PSV4 323 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 OTUD1Q5VV17 481 aaPredicted RBP14.17□□□□□ -0.14
VMP1-210ENST00000589823 CC2D1AQ6P1N0 951 aaPredicted RBP14.17□□□□□ -0.14
VMP1-210ENST00000589823 YAF2Q8IY57 180 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 CENPIQ92674 756 aaPredicted RBP14.17□□□□□ -0.14
VMP1-210ENST00000589823 FGF14Q92915 247 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 BTBD6Q96KE9 485 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 KXD1Q9BQD3 176 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 LACRTQ9GZZ8 138 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 WDCPQ9H6R7 721 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 PIGVQ9NUD9 493 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 THG1LQ9NWX6 298 aaKnown RBP14.17□□□□□ -0.14
VMP1-210ENST00000589823 LIMD1Q9UGP4 676 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 ZNF510Q9Y2H8 683 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 NUMBLQ9Y6R0 609 aa14.17□□□□□ -0.14
VMP1-210ENST00000589823 NUP210Q8TEM1 1887 aaPredicted RBP14.16□□□□□ -0.14
VMP1-210ENST00000589823 PRUNE2Q8WUY3 3088 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 TMEM110-MUSTN1A8MSY1 372 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 ANHXE9PGG2 379 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 ZSCAN12O43309 604 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 PROSCO94903 275 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 IGLV3-27P01718 113 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 CORO1AP31146 461 aaKnown RBP14.16□□□□□ -0.14
VMP1-210ENST00000589823 HADHBP55084 474 aaKnown RBP14.16□□□□□ -0.14
VMP1-210ENST00000589823 ZNF252P-AS1Q0IIN9 211 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 MTA1Q13330 715 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 EIF4EBP2Q13542 120 aaPredicted RBP14.16□□□□□ -0.14
VMP1-210ENST00000589823 HTR4Q13639 388 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 MESDQ14696 234 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 PPP2R5DQ14738 602 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 ZC3H12AQ5D1E8 599 aaKnown RBP14.16□□□□□ -0.14
VMP1-210ENST00000589823 SH3PXD2AQ5TCZ1 1133 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 SCYL2Q6P3W7 929 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 VITQ6UXI7 678 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 BNIPLQ7Z465 357 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 MFSD6LQ8IWD5 586 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 KIAA1958Q8N8K9 716 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 NIPA2Q8N8Q9 360 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 ATP6V0D2Q8N8Y2 350 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 ST13P5Q8NFI4 369 aaPredicted RBP14.16□□□□□ -0.14
VMP1-210ENST00000589823 ADAMTS19Q8TE59 1207 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 DEPDC1BQ8WUY9 529 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 SLC39A13Q96H72 371 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 FCRL2Q96LA5 508 aaPredicted RBP14.16□□□□□ -0.14
VMP1-210ENST00000589823 ADAM33Q9BZ11 813 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 CALCOCO1Q9P1Z2 691 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 IGSF9Q9P2J2 1179 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 PPP2R2CQ9Y2T4 447 aa14.16□□□□□ -0.14
VMP1-210ENST00000589823 DOCK8Q8NF50 2099 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 SLC9A3R1O14745 358 aaPredicted RBP14.15□□□□□ -0.14
VMP1-210ENST00000589823 BUB1O43683 1085 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 LATS1O95835 1130 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 MOCS2O96007 188 aaPredicted RBP14.15□□□□□ -0.14
VMP1-210ENST00000589823 BMP1P13497 986 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 PSMC3P17980 439 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 SSR1P43307 286 aaKnown RBP14.15□□□□□ -0.14
VMP1-210ENST00000589823 IFNAR2P48551 515 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 SLC11A2P49281 568 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 CXCR3P49682 368 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 ATXN1P54253 815 aaKnown RBP14.15□□□□□ -0.14
VMP1-210ENST00000589823 HDAC4P56524 1084 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 ZP2Q05996 745 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 ARL13BQ3SXY8 428 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 ARHGAP29Q52LW3 1261 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 HTR3DQ70Z44 454 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 FAM131BQ86XD5 332 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 RSPRY1Q96DX4 576 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 TRIM44Q96DX7 344 aaPredicted RBP14.15□□□□□ -0.14
VMP1-210ENST00000589823 BTN2A3PQ96KV6 586 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 KCNK12Q9HB15 430 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 TBC1D14Q9P2M4 693 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.15□□□□□ -0.14
VMP1-210ENST00000589823 DUSP10Q9Y6W6 482 aa14.15□□□□□ -0.14
VMP1-210ENST00000589823 COL6A3P12111 3177 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 HELZP42694 1942 aaKnown RBP14.14□□□□□ -0.15
VMP1-210ENST00000589823 A0A0U1RQJ8 604 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 MACROD2A1Z1Q3 448 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 PRPSAP2O60256 369 aa14.14□□□□□ -0.15
VMP1-210ENST00000589823 LRCH4O75427 683 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms