RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 SNX9Q9Y5X1 595 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 SPDYE5A6NIY4 337 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 LSM1O15116 133 aaKnown RBP15□□□□□ -0.01
SMARCA4-214ENST00000589677 TRMUO75648 421 aaKnown RBP15□□□□□ -0.01
SMARCA4-214ENST00000589677 SPDYE7PQ495Y7 208 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 TTC23Q5W5X9 447 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 TTC7BQ86TV6 843 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 STK32CQ86UX6 486 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 CBWD2Q8IUF1 395 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 TMEM143Q96AN5 459 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 ASIC4Q96FT7 647 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 RPAP3Q9H6T3 665 aaPredicted RBP15□□□□□ -0.01
SMARCA4-214ENST00000589677 DRG1Q9Y295 367 aaKnown RBP15□□□□□ -0.01
SMARCA4-214ENST00000589677 H3BNX3 289 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 IMPDH2P12268 514 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 PIK3R1P27986 724 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 AKT1P31749 480 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 RAD51Q06609 339 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 VAC14Q08AM6 782 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 GOLGA7BQ2TAP0 167 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 PKN3Q6P5Z2 889 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 ATG16L2Q8NAA4 619 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 UBA3Q8TBC4 463 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 C17orf50Q8WW18 174 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 ITFG2Q969R8 447 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 CHST12Q9NRB3 414 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 SQORQ9Y6N5 450 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 COL15A1P39059 1388 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 PGK2P07205 417 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 HSMCR30P0CW71 290 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 RRM2P31350 389 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 NME5P56597 212 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 ILF2Q12905 390 aaKnown RBP15□□□□□ -0.01
SMARCA4-214ENST00000589677 TAF5Q15542 800 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 TMEM119Q4V9L6 283 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 OTOAQ7RTW8 1153 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 PTTG2Q9NZH5 202 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 KIAA1257Q9ULG3 409 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 CENPXA8MT69 81 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 VWA5AO00534 786 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 PGAM1P18669 254 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 TKTP29401 623 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 PKNOX1P55347 436 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 SUPT20HL1Q3ZLR7 823 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 C2CD6Q53TS8 623 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 ZDHHC13Q8IUH4 622 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 PRELID2Q8N945 189 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 ADCY4Q8NFM4 1077 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 BAP1Q92560 729 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 MMTAG2Q9BU76 263 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 SPON2Q9BUD6 331 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 DNPEPQ9ULA0 475 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 SNPHO15079 494 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 PAEPP09466 180 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 MAPK10P53779 464 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 TIMM50Q3ZCQ8 353 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 PERM1Q5SV97 790 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 APPL2Q8NEU8 664 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 SH2D3AQ9BRG2 576 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 TRIM8Q9BZR9 551 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 S100A14Q9HCY8 104 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 SLC30A1Q9Y6M5 507 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 POLRMTO00411 1230 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 TRIM38O00635 465 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 MAGEC1O60732 1142 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 RPL14P50914 215 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 STAT5BP51692 787 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 BNC1Q01954 994 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 TRIM71Q2Q1W2 868 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 MRNIPQ6NTE8 343 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 UGT3A1Q6NUS8 523 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 KAZALD1Q96I82 304 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 SPATA17Q96L03 361 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 RNF112Q9ULX5 631 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 BIRC5O15392 142 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 SEC24AO95486 1093 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 NDUFB10O96000 172 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 MAPTP10636 758 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 MAPK1P28482 360 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 FCHO2Q0JRZ9 810 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 ZCCHC23Q6ZST2 131 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 PALB2Q86YC2 1186 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 SIX5Q8N196 739 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 RP9Q8TA86 221 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 UBASH3BQ8TF42 649 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 RNF145Q96MT1 663 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 TMEM109Q9BVC6 243 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 FAM49BQ9NUQ9 324 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 RAB26Q9ULW5 256 aa14.99□□□□□ -0.01
SMARCA4-214ENST00000589677 ADRA2BP18089 450 aa14.98□□□□□ -0.01
SMARCA4-214ENST00000589677 HK2P52789 917 aa14.98□□□□□ -0.01
SMARCA4-214ENST00000589677 FRG1Q14331 258 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-214ENST00000589677 PDIA6Q15084 440 aa14.98□□□□□ -0.01
SMARCA4-214ENST00000589677 SPANXN3Q5MJ09 141 aa14.98□□□□□ -0.01
SMARCA4-214ENST00000589677 ISLR2Q6UXK2 745 aa14.98□□□□□ -0.01
SMARCA4-214ENST00000589677 EGFL6Q8IUX8 553 aa14.98□□□□□ -0.01
SMARCA4-214ENST00000589677 AMER2Q8N7J2 671 aa14.98□□□□□ -0.01
SMARCA4-214ENST00000589677 CBWD1Q9BRT8 395 aa14.98□□□□□ -0.01
SMARCA4-214ENST00000589677 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms