RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 MTA1Q13330 715 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 KCNJ11Q14654 390 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 LONRF1Q17RB8 773 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 CCDC38Q502W7 563 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 ACBD5Q5T8D3 534 aaPredicted RBP10.76□□□□□ -0.69
VPS25-203ENST00000589520 HEATR6Q6AI08 1181 aaKnown RBP10.76□□□□□ -0.69
VPS25-203ENST00000589520 VSTM1Q6UX27 236 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 LRRC8DQ7L1W4 858 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 RTN4RL1Q86UN2 441 aaPredicted RBP10.76□□□□□ -0.69
VPS25-203ENST00000589520 EXOC3L1Q86VI1 746 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 CCNJLQ8IV13 435 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 COLGALT2Q8IYK4 626 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 VPS52Q8N1B4 723 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 CCDC185Q8N715 623 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 SLC7A14Q8TBB6 771 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 EPS8L3Q8TE67 593 aaKnown RBP10.76□□□□□ -0.69
VPS25-203ENST00000589520 RNF139Q8WU17 664 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 C9orf72Q96LT7 481 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 OLFM3Q96PB7 478 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 QKIQ96PU8 341 aaKnown RBP eCLIP10.76□□□□□ -0.69
VPS25-203ENST00000589520 EPAS1Q99814 870 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 COLEC11Q9BWP8 271 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 TRPV6Q9H1D0 765 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 OSBPL2Q9H1P3 480 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 VPS37BQ9H9H4 285 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 LRRC4CQ9HCJ2 640 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 SSU72Q9NP77 194 aaKnown RBP10.76□□□□□ -0.69
VPS25-203ENST00000589520 GPATCH2LQ9NWQ4 482 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 NAALADL1Q9UQQ1 740 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 PCDHB7Q9Y5E2 793 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 HEY1Q9Y5J3 304 aa10.76□□□□□ -0.69
VPS25-203ENST00000589520 COL6A3P12111 3177 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 OR6C75A6NL08 312 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 YJEFN3A6XGL0 299 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 E7ENQ6 273 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 TRIM66O15016 1216 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 OPHN1O60890 802 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 MLNP12872 115 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 SERPINB6P35237 376 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 NDUFV1P49821 464 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 HNRNPH2P55795 449 aaKnown RBP10.75□□□□□ -0.69
VPS25-203ENST00000589520 GEMIN4P57678 1058 aaKnown RBP10.75□□□□□ -0.69
VPS25-203ENST00000589520 IFI35P80217 286 aaPredicted RBP10.75□□□□□ -0.69
VPS25-203ENST00000589520 RAB6CQ53S08 254 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 BRMS1LQ5PSV4 323 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 NCBP2-AS2Q69YL0 99 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 KCNT2Q6UVM3 1135 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 NPNTQ6UXI9 565 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 ARHGEF18Q6ZSZ5 1173 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 CYS1Q717R9 158 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 PRUNE1Q86TP1 453 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 NLRP14Q86W24 1093 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 FAM131BQ86XD5 332 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 ABI1Q8IZP0 508 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 UHMK1Q8TAS1 419 aaKnown RBP10.75□□□□□ -0.69
VPS25-203ENST00000589520 HTR3CQ8WXA8 447 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 ALKBH8Q96BT7 664 aaKnown RBP10.75□□□□□ -0.69
VPS25-203ENST00000589520 SGSM3Q96HU1 749 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 C8orf48Q96LL4 319 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 XPO6Q96QU8 1125 aaKnown RBP10.75□□□□□ -0.69
VPS25-203ENST00000589520 KCNK16Q96T55 309 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 CYTH2Q99418 400 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 VAT1Q99536 393 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 TMEM175Q9BSA9 504 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 MRPL9Q9BYD2 267 aaKnown RBP10.75□□□□□ -0.69
VPS25-203ENST00000589520 ZCWPW1Q9H0M4 648 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 RAB6CQ9H0N0 254 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 FBXO44Q9H4M3 255 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 WDCPQ9H6R7 721 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 XAB2Q9HCS7 855 aaKnown RBP10.75□□□□□ -0.69
VPS25-203ENST00000589520 EIF2B3Q9NR50 452 aaKnown RBP10.75□□□□□ -0.69
VPS25-203ENST00000589520 ARHGEF4Q9NR80 690 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 RAB6BQ9NRW1 208 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 INTS9Q9NV88 658 aaKnown RBP10.75□□□□□ -0.69
VPS25-203ENST00000589520 ETNK2Q9NVF9 386 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 EURLQ9NYK6 297 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 DONSONQ9NYP3 566 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 DTLQ9NZJ0 730 aa10.75□□□□□ -0.69
VPS25-203ENST00000589520 SMG5Q9UPR3 1016 aaKnown RBP10.75□□□□□ -0.69
VPS25-203ENST00000589520 A0A0A0MRY4 1105 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 CARNS1A5YM72 827 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 SMIM23A6NLE4 172 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 AP3B1O00203 1094 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 ENPP3O14638 875 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 NRP1O14786 923 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 TADA2AO75478 443 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 ALDH2P05091 517 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 FYNP06241 537 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 USP17L7P0C7H9 530 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 CHN1P15882 459 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 GOT1P17174 413 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 TFE3P19532 575 aaPredicted RBP10.74□□□□□ -0.69
VPS25-203ENST00000589520 AMPD1P23109 780 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 BDNFP23560 247 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 GBP2P32456 591 aaPredicted RBP10.74□□□□□ -0.69
VPS25-203ENST00000589520 STX2P32856 288 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 MAGEA11P43364 429 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 SLCO1A2P46721 670 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 COG7P83436 770 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 NME3Q13232 169 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms