RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ENPEPQ07075 957 aa19.34■□□□□ 0.69
CCDC43-204ENST00000588687 ZCWPW2Q504Y3 356 aa19.34■□□□□ 0.69
CCDC43-204ENST00000588687 RAB41Q5JT25 222 aa19.34■□□□□ 0.69
CCDC43-204ENST00000588687 TMEM215Q68D42 235 aa19.34■□□□□ 0.69
CCDC43-204ENST00000588687 BHLHA9Q7RTU4 235 aa19.34■□□□□ 0.69
CCDC43-204ENST00000588687 PRDM16Q9HAZ2 1276 aa19.34■□□□□ 0.69
CCDC43-204ENST00000588687 ITM2CQ9NQX7 267 aa19.34■□□□□ 0.69
CCDC43-204ENST00000588687 AGO1Q9UL18 857 aaKnown RBP19.34■□□□□ 0.69
CCDC43-204ENST00000588687 NUMA1Q14980 2115 aa19.33■□□□□ 0.69
CCDC43-204ENST00000588687 NPC1O15118 1278 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 ZBTB24O43167 697 aaPredicted RBP19.33■□□□□ 0.68
CCDC43-204ENST00000588687 NDUFS2O75306 463 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 MYL1P05976 194 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 PRR29P0C7W0 189 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 NR2F2P24468 414 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 PRKCHP24723 683 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 TPMTP51580 245 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 ZNF132P52740 706 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 TRIP6Q15654 476 aaKnown RBP19.33■□□□□ 0.68
CCDC43-204ENST00000588687 WDR45BQ5MNZ6 344 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 SYCP2LQ5T4T6 812 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 INTS8Q75QN2 995 aaKnown RBP19.33■□□□□ 0.68
CCDC43-204ENST00000588687 PROSER1Q86XN7 944 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 RGL4Q8IZJ4 473 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 CADM4Q8NFZ8 388 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 C1orf216Q8TAB5 229 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 ADAMTS14Q8WXS8 1223 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 IMPG2Q9BZV3 1241 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 RASAL2Q9UJF2 1139 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 ZNF510Q9Y2H8 683 aa19.33■□□□□ 0.68
CCDC43-204ENST00000588687 A0A1B0GTW7 788 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 A0A1B0GVL5 298 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 CALUO43852 315 aaPredicted RBP19.32■□□□□ 0.68
CCDC43-204ENST00000588687 RHOBTB3O94955 611 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 FTH1P19P0C7X4 201 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 NCAM1P13591 858 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 CHKAP35790 457 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 COG7P83436 770 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 EFEMP1Q12805 493 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 ZNF234Q14588 700 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 STARD3Q14849 445 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 ANKS1BQ7Z6G8 1248 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 GLRX5Q86SX6 157 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 TADA2BQ86TJ2 420 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 CPXM2Q8N436 756 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 ZCCHC9Q8N567 271 aaKnown RBP19.32■□□□□ 0.68
CCDC43-204ENST00000588687 SLC4A11Q8NBS3 891 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 BAHD1Q8TBE0 780 aaPredicted RBP19.32■□□□□ 0.68
CCDC43-204ENST00000588687 SEMA4DQ92854 862 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 CDK5RAP1Q96SZ6 601 aaKnown RBP19.32■□□□□ 0.68
CCDC43-204ENST00000588687 ARID3AQ99856 593 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 GPR174Q9BXC1 333 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 ZDHHC5Q9C0B5 715 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 TMEM8AQ9HCN3 771 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 SLCO1B1Q9Y6L6 691 aa19.32■□□□□ 0.68
CCDC43-204ENST00000588687 KNL1Q8NG31 2342 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 FAM237AA0A1B0GTK4 181 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 RALAP11233 206 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 GNSP15586 552 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 TRIM21P19474 475 aaKnown RBP19.31■□□□□ 0.68
CCDC43-204ENST00000588687 CMA1P23946 247 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 COL9A2Q14055 689 aaPredicted RBP19.31■□□□□ 0.68
CCDC43-204ENST00000588687 EIF4HQ15056 248 aaKnown RBP19.31■□□□□ 0.68
CCDC43-204ENST00000588687 ZNF394Q53GI3 561 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 LRSAM1Q6UWE0 723 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 PIGZQ86VD9 579 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 FAM186BQ8IYM0 893 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 SORCS1Q8WY21 1168 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 IL21RQ9HBE5 538 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 ELOVL2Q9NXB9 296 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 USP25Q9UHP3 1055 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 PCOLCE2Q9UKZ9 415 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 CFAP45Q9UL16 551 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 ACACAQ13085 2346 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 ADAMTS20P59510 1910 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 TMEM131Q92545 1883 aa19.31■□□□□ 0.68
CCDC43-204ENST00000588687 MEI4A8MW99 385 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 HMBSP08397 361 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 HOXD9P28356 352 aaPredicted RBP19.3■□□□□ 0.68
CCDC43-204ENST00000588687 RAD23BP54727 409 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 DPYDQ12882 1025 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 DCAF12L1Q5VU92 463 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 ARHGAP17Q68EM7 881 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 TMPRSS6Q8IU80 811 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 DENND1CQ8IV53 801 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 PNPLA1Q8N8W4 532 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 FAXDC2Q96IV6 333 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 UBXN6Q9BZV1 441 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 DCLK3Q9C098 648 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 TOR4AQ9NXH8 423 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 MARCH2Q9P0N8 246 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 LHX6Q9UPM6 363 aa19.3■□□□□ 0.68
CCDC43-204ENST00000588687 FNDC3AQ9Y2H6 1198 aaKnown RBP19.3■□□□□ 0.68
CCDC43-204ENST00000588687 METTL12A8MUP2 240 aa19.29■□□□□ 0.68
CCDC43-204ENST00000588687 TULP2O00295 520 aa19.29■□□□□ 0.68
CCDC43-204ENST00000588687 DKK1O94907 266 aa19.29■□□□□ 0.68
CCDC43-204ENST00000588687 ZNF883P0CG24 379 aa19.29■□□□□ 0.68
CCDC43-204ENST00000588687 TRIP4Q15650 581 aaPredicted RBP19.29■□□□□ 0.68
CCDC43-204ENST00000588687 PM20D1Q6GTS8 502 aa19.29■□□□□ 0.68
CCDC43-204ENST00000588687 SLCO6A1Q86UG4 719 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms