RNA–Protein interactions for RNA: ENST00000588629.1

ATP6V0A1-218, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 1,797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-218ENST00000588629 L1CAMP32004 1257 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 AIF1P55008 147 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 COPS2P61201 443 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 ADCY2Q08462 1091 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 SCAPQ12770 1279 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 MMRN1Q13201 1228 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 KCNC3Q14003 757 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 DPYSL3Q14195 570 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 TAZQ16635 292 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 TFDP3Q5H9I0 405 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 PSTKQ8IV42 348 aaKnown RBP20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 ZDHHC14Q8IZN3 488 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 FAM71BQ8TC56 605 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 RNF34Q969K3 372 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CDK5RAP1Q96SZ6 601 aaKnown RBP20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CALN1Q9BXU9 219 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 PCDH18Q9HCL0 1135 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 ZDHHC7Q9NXF8 308 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 ARHGEF38Q9NXL2 777 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 DPP7Q9UHL4 492 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 NR2E1Q9Y466 385 aa20.18■□□□□ 0.82
ATP6V0A1-218ENST00000588629 hCG_1818297A0A087WSY0 165 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 HNRNPA1P09651 372 aaKnown RBP eCLIP20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 IL4RP24394 825 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CCR1P32246 355 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 PTPN7P35236 360 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 ATP5C1P36542 298 aaKnown RBP20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 NNTQ13423 1086 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 KRT81Q14533 505 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 PDK2Q15119 407 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 PPP2R5EQ16537 467 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 PABPC1LQ4VXU2 614 aaKnown RBP20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 PPP6R3Q5H9R7 873 aaPredicted RBP20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 KLHDC10Q6PID8 442 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 TADA2BQ86TJ2 420 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 SPATA4Q8NEY3 305 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 FCRL2Q96LA5 508 aaPredicted RBP20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 KCTD15Q96SI1 283 aaPredicted RBP20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 AP1M1Q9BXS5 423 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 RNF38Q9H0F5 515 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 ASAH2Q9NR71 780 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 DNMT3LQ9UJW3 386 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 COLQQ9Y215 455 aaPredicted RBP20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 OBSL1O75147 1896 aa20.17■□□□□ 0.82
ATP6V0A1-218ENST00000588629 SLC12A8A0AV02 714 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CTAGE15A4D2H0 777 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CTAGE8P0CG41 777 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 TBX4P57082 545 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 C2orf54Q08AI8 447 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 KLF1Q13351 362 aaPredicted RBP20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 PPP2R5DQ14738 602 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 TRIP4Q15650 581 aaPredicted RBP20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 ARL13BQ3SXY8 428 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 EFHC2Q5JST6 749 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 BRMS1LQ5PSV4 323 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 KAZNQ674X7 775 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CTAGE6Q86UF2 777 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CTAGE4Q8IX94 777 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 MNS1Q8NEH6 495 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 NAP1L3Q99457 506 aaPredicted RBP20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 NACA2Q9H009 215 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 DNMT3BQ9UBC3 853 aaKnown RBP20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 ANAPC1Q9H1A4 1944 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CCDC195A0A1B0GUA6 201 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 A0A1W2PPC1 479 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 A0A1W2PRU2 124 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 KCNU1A8MYU2 1149 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 IGLV3-27P01718 113 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 MYL4P12829 197 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CCR2P41597 374 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 EPHA5P54756 1037 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CYP4F8P98187 520 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 SIX1Q15475 284 aaPredicted RBP20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 TXNDC8Q6A555 127 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 MAP7D3Q8IWC1 876 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 TSC1Q92574 1164 aa20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 ZNF707Q96C28 371 aaPredicted RBP20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CDCA3Q99618 268 aaPredicted RBP20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 RBM12Q9NTZ6 932 aaKnown RBP20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 XPO7Q9UIA9 1087 aaKnown RBP20.16■□□□□ 0.82
ATP6V0A1-218ENST00000588629 KRIT1O00522 736 aa20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 GJA1P17302 382 aa20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 PTPN2P17706 415 aa20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CDC25CP30307 473 aa20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CETN2P41208 172 aa20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 CLUL1Q15846 466 aa20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 SLC22A12Q96S37 553 aa20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 ZNF670Q9BS34 389 aa20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 PRKD2Q9BZL6 878 aa20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 ATXN3LQ9H3M9 355 aa20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 NSUN3Q9H649 340 aaKnown RBP20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 IGFLR1Q9H665 355 aa20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 TRPC7Q9HCX4 862 aa20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.15■□□□□ 0.82
ATP6V0A1-218ENST00000588629 SPDYE4A6NLX3 237 aa20.14■□□□□ 0.81
ATP6V0A1-218ENST00000588629 FAM72CH0Y354 149 aa20.14■□□□□ 0.81
ATP6V0A1-218ENST00000588629 XYLBO75191 536 aa20.14■□□□□ 0.81
ATP6V0A1-218ENST00000588629 OLFM2O95897 454 aa20.14■□□□□ 0.81
ATP6V0A1-218ENST00000588629 RHOP08100 348 aa20.14■□□□□ 0.81
ATP6V0A1-218ENST00000588629 HMBSP08397 361 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms