RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 GTPBP4Q9BZE4 634 aaKnown RBP15.01□□□□□ -0.01
VMP1-206ENST00000587945 METTL14Q9HCE5 456 aaKnown RBP15.01□□□□□ -0.01
VMP1-206ENST00000587945 SFMBT1Q9UHJ3 866 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 EVLQ9UI08 416 aaPredicted RBP15.01□□□□□ -0.01
VMP1-206ENST00000587945 SLC27A6Q9Y2P4 619 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 PCDHB4Q9Y5E5 795 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 STON1Q9Y6Q2 735 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 CNOT1A5YKK6 2376 aaKnown RBP15□□□□□ -0.01
VMP1-206ENST00000587945 AP5Z1O43299 807 aa15□□□□□ -0.01
VMP1-206ENST00000587945 TSPAN3O60637 253 aa15□□□□□ -0.01
VMP1-206ENST00000587945 GABBR2O75899 941 aa15□□□□□ -0.01
VMP1-206ENST00000587945 TBXAS1P24557 533 aaPredicted RBP15□□□□□ -0.01
VMP1-206ENST00000587945 PMLP29590 882 aa15□□□□□ -0.01
VMP1-206ENST00000587945 IL12RB1P42701 662 aa15□□□□□ -0.01
VMP1-206ENST00000587945 MAPK8P45983 427 aa15□□□□□ -0.01
VMP1-206ENST00000587945 NOVA1P51513 510 aaKnown RBP15□□□□□ -0.01
VMP1-206ENST00000587945 STX17P56962 302 aa15□□□□□ -0.01
VMP1-206ENST00000587945 TRIP4Q15650 581 aaPredicted RBP15□□□□□ -0.01
VMP1-206ENST00000587945 PKDCCQ504Y2 493 aa15□□□□□ -0.01
VMP1-206ENST00000587945 SPDYCQ5MJ68 293 aa15□□□□□ -0.01
VMP1-206ENST00000587945 KIAA1324Q6UXG2 1013 aaKnown RBP15□□□□□ -0.01
VMP1-206ENST00000587945 SLC36A4Q6YBV0 504 aa15□□□□□ -0.01
VMP1-206ENST00000587945 SLC41A1Q8IVJ1 513 aa15□□□□□ -0.01
VMP1-206ENST00000587945 SIX6OS1Q8N1H7 587 aa15□□□□□ -0.01
VMP1-206ENST00000587945 PPM1KQ8N3J5 372 aa15□□□□□ -0.01
VMP1-206ENST00000587945 DDI1Q8WTU0 396 aa15□□□□□ -0.01
VMP1-206ENST00000587945 RNF139Q8WU17 664 aa15□□□□□ -0.01
VMP1-206ENST00000587945 NELFBQ8WX92 580 aa15□□□□□ -0.01
VMP1-206ENST00000587945 PLD4Q96BZ4 506 aa15□□□□□ -0.01
VMP1-206ENST00000587945 MRGPRX1Q96LB2 322 aa15□□□□□ -0.01
VMP1-206ENST00000587945 ZSWIM1Q9BR11 485 aa15□□□□□ -0.01
VMP1-206ENST00000587945 NUSAP1Q9BXS6 441 aaKnown RBP15□□□□□ -0.01
VMP1-206ENST00000587945 PILRBQ9UKJ0 227 aa15□□□□□ -0.01
VMP1-206ENST00000587945 CTNND2Q9UQB3 1225 aa15□□□□□ -0.01
VMP1-206ENST00000587945 GFRA2O00451 464 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 MSI1O43347 362 aaKnown RBP14.99□□□□□ -0.01
VMP1-206ENST00000587945 CYBBP04839 570 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 CFIP05156 583 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 SETSIPP0DME0 302 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 ENGP17813 658 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 BRD2P25440 801 aaKnown RBP14.99□□□□□ -0.01
VMP1-206ENST00000587945 ZNF33AQ06730 810 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 FUT11Q495W5 492 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 SH3PXD2AQ5TCZ1 1133 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 LCLAT1Q6UWP7 414 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 RRAGAQ7L523 313 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 ARHGEF19Q8IW93 802 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 ELOA2Q8IYF1 753 aaPredicted RBP14.99□□□□□ -0.01
VMP1-206ENST00000587945 CPXM2Q8N436 756 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 LMO3Q8TAP4 145 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 SORCS1Q8WY21 1168 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 KCTD13Q8WZ19 329 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 PIWIL1Q96J94 861 aaKnown RBP14.99□□□□□ -0.01
VMP1-206ENST00000587945 ELOVL2Q9NXB9 296 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 THAP10Q9P2Z0 257 aaPredicted RBP14.99□□□□□ -0.01
VMP1-206ENST00000587945 KIAA1257Q9ULG3 409 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 LAMA1P25391 3075 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 ACACBO00763 2458 aa14.99□□□□□ -0.01
VMP1-206ENST00000587945 PMM2O15305 246 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 ZNF217O75362 1048 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 PAEPP09466 180 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 HARS2P49590 506 aaKnown RBP14.98□□□□□ -0.01
VMP1-206ENST00000587945 DAOAP59103 153 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 LMAN2Q12907 356 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 MORC3Q14149 939 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 TMEM215Q68D42 235 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 PMF1Q6P1K2 205 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 ANKS1BQ7Z6G8 1248 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 FAM217AQ8IXS0 508 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 TRIML1Q8N9V2 468 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 CLEC4CQ8WTT0 213 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 SLC35F5Q8WV83 523 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 HSPA12BQ96MM6 686 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 CIPCQ9C0C6 399 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 MKRN2Q9H000 416 aaKnown RBP14.98□□□□□ -0.01
VMP1-206ENST00000587945 CNGB3Q9NQW8 809 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 OLA1Q9NTK5 396 aaKnown RBP14.98□□□□□ -0.01
VMP1-206ENST00000587945 ANGPTL2Q9UKU9 493 aa14.98□□□□□ -0.01
VMP1-206ENST00000587945 HBS1LQ9Y450 684 aaKnown RBP14.98□□□□□ -0.01
VMP1-206ENST00000587945 M0QYV0 167 aa14.97□□□□□ -0.01
VMP1-206ENST00000587945 HOXD9P28356 352 aaPredicted RBP14.97□□□□□ -0.01
VMP1-206ENST00000587945 PPP1R2P41236 205 aa14.97□□□□□ -0.01
VMP1-206ENST00000587945 ZNF234Q14588 700 aa14.97□□□□□ -0.01
VMP1-206ENST00000587945 STARD3Q14849 445 aa14.97□□□□□ -0.01
VMP1-206ENST00000587945 CNGA2Q16280 664 aa14.97□□□□□ -0.01
VMP1-206ENST00000587945 PEAR1Q5VY43 1037 aaPredicted RBP14.97□□□□□ -0.01
VMP1-206ENST00000587945 SLC23A3Q6PIS1 610 aa14.97□□□□□ -0.01
VMP1-206ENST00000587945 RBBP8NLQ8NC74 664 aaPredicted RBP14.97□□□□□ -0.01
VMP1-206ENST00000587945 EHBP1Q8NDI1 1231 aa14.97□□□□□ -0.01
VMP1-206ENST00000587945 DEFB124Q8NES8 71 aa14.97□□□□□ -0.01
VMP1-206ENST00000587945 UCMAQ8WVF2 138 aa14.97□□□□□ -0.01
VMP1-206ENST00000587945 KREMEN1Q96MU8 473 aa14.97□□□□□ -0.01
VMP1-206ENST00000587945 GTPBP2Q9BX10 602 aaKnown RBP14.97□□□□□ -0.01
VMP1-206ENST00000587945 ABCC13Q9NSE7 274 aa14.97□□□□□ -0.01
VMP1-206ENST00000587945 SLC6A14Q9UN76 642 aa14.97□□□□□ -0.01
VMP1-206ENST00000587945 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.97□□□□□ -0.01
VMP1-206ENST00000587945 MYH10P35580 1976 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 P4HA2O15460 535 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 SYNCRIPO60506 623 aaKnown RBP14.96□□□□□ -0.01
VMP1-206ENST00000587945 NDUFS2O75306 463 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms